Gene TM1040_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1368 
Symbol 
ID4075861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1461575 
End bp1462117 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID638006678 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_613363 
Protein GI99081209 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.282504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC GACCATATGT CATTGATGTA ATGATCTCGG CCAAGGCCAT CGCTGCACGA 
ATCGAAGAGC TATGCGGCGA CATCACGGCC GAGTTTGGCG ATACCGACAA GCTCGTGGTC
GTGGGCCTGC TGCGCGGAAG TTTTGTCTTT ATCGCGGATC TGGTGCGTGA GCTGGATCTC
CCGATCGAGG TCGACTTCCT TGAGGCGTCC TCTTATGGCG ACGGCATGGA AAGCAGCCGA
GAAGTGCGCA TTCTCAAAGA CTTGCGTGGC GCTATTGAAG GGCGCGATGT GCTGGTGGTT
GAGGATATCG TCGACACGGG CCATACCCTG AACCATGTGA TCTCGCTCCT GAAGAGCCGC
AAGCCTGCGC GTCTCAAATC CATTGCGCTT CTGGACAAAC CCTCGCGTCG CGAAGTCGAC
TTTCGCGCAG ATTGGATCGG CTTTGAGATC CCGGATGAAT TTGTCGTGGG CTACGGAATC
GACTTTGCCC AACGCAACCG CAACCTGCCT CACATTGGCA AAGTGCGCTT CACCGAAGTG
TGA
 
Protein sequence
MSERPYVIDV MISAKAIAAR IEELCGDITA EFGDTDKLVV VGLLRGSFVF IADLVRELDL 
PIEVDFLEAS SYGDGMESSR EVRILKDLRG AIEGRDVLVV EDIVDTGHTL NHVISLLKSR
KPARLKSIAL LDKPSRREVD FRADWIGFEI PDEFVVGYGI DFAQRNRNLP HIGKVRFTEV