| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1364 |
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| Symbol | |
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| ID | 4076381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1458902 |
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| End bp | 1460050 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006674 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_613359 |
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| Protein GI | 99081205 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG CCGTATTGAT CGTTGCCGCC GGCAAAGGCA CCCGCGCAGG CGGTGGTCTC
GCCAAGCAAT GGCGCCCACT GGCCGGGCGA CTGGTCATCG ACTGGACGAT CGAGGCCTTT
CAACGTGCGG GGTGCGGCAC CATCATGGTT GTGCGCGATC CCGACAATGA GCACGCGATC
GAGGCGCTTG CGCCCTACCC TGAATTATTG CTCGCAGATG GCGGTCCCTC GCGGTCTGAA
TCCGTGCGTA ACGGTTTGAT TGCGCTCCAA GAGATCGGTG TCGAACGCGT TCTTATTCAT
GACGCGGCGC GTCCATGTGT GTGTCCTCAG GTGATCCAAC AGGTGCTCGA CGCACTTGAT
GACACGCCTG CTGCCGCGCC AGGACTTGCG GTGACAGATG CGCTTTGGAC CGGGGCCGAT
GGCCATGTCA CAGGCACGCA GGACCGAAGC GCGCTCTTTG CGGCGCAAAC GCCGCAAGGC
TTTCATTTTG ACGCGATCCT TGCGGCGCAT ATGCGCCACG ACGGCACCGC AGCGGATGAT
GTCGAGGTTG CCCGTCAAGC GGGGCTCGCG GTCCGTATCA CGCCGGGTGA CGTCAATAAT
ATCAAGATCA CCCGGCCCGA AGATTTCTCC CGCGCCGAGC ACATATTGAG GAGCACCATG
GACAACATTC CTGACATCAG GCTTGGAAAT GGCTATGACG TTCACCGGTT CGGACCCGGG
GATCATGTCA TGCTCTGTGG GGTTCAAGTG CCGCATGAGC GCGGTCTGCA AGGCCATTCC
GATGCGGATG TGGGCATGCA CGCGGTCACC GACGCACTCT ACGGGGCGAT GGCAGAGGGC
GACATCGGCC GCCACTTCCC GCCAAGCGAC CCTCAGTGGA AAGGCGCGGC GTCGGACATC
TTCCTGCGCC ATGCGGTCGA ATTGGCACGC TCCAAAGGGT TCACCATCAA TAACGTGGAT
TGCACCCTCG TCTGTGAATA CCCCAAAGTC GGCCCCCACG CAGAGGCGAT GCGCGCCCGG
ATGGCAGAGA TCATGGGCAT GGATATGGGA CGCCTCTCGA TCAAGGCGAC AACTTCAGAG
CGGCTTGGGT TCACCGGTCG CAAAGAAGGC ATCGCGGCAC TGGCGACAGC AACATTGGTG
CGGGCATGA
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| Protein sequence | MTLAVLIVAA GKGTRAGGGL AKQWRPLAGR LVIDWTIEAF QRAGCGTIMV VRDPDNEHAI
EALAPYPELL LADGGPSRSE SVRNGLIALQ EIGVERVLIH DAARPCVCPQ VIQQVLDALD
DTPAAAPGLA VTDALWTGAD GHVTGTQDRS ALFAAQTPQG FHFDAILAAH MRHDGTAADD
VEVARQAGLA VRITPGDVNN IKITRPEDFS RAEHILRSTM DNIPDIRLGN GYDVHRFGPG
DHVMLCGVQV PHERGLQGHS DADVGMHAVT DALYGAMAEG DIGRHFPPSD PQWKGAASDI
FLRHAVELAR SKGFTINNVD CTLVCEYPKV GPHAEAMRAR MAEIMGMDMG RLSIKATTSE
RLGFTGRKEG IAALATATLV RA
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