| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1361 |
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| Symbol | |
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| ID | 4076378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1455239 |
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| End bp | 1456618 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006671 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_613356 |
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| Protein GI | 99081202 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGCA CCGTTCTTGT TGCAGATGAT GACCGTACGA TCCGCACTGT GCTCACACAG
GCGCTGACGC GGGCGGGGTG CAAGGTCCAT GCGACGTCCT CTCTCACAAC GTTGATGCGC
TGGGTTGGCG AAGGCAAAGG CGATGTTGTG ATCTCCGACG TGATGATGCC GGACGGCAAT
GGGCTGGAGA TGCTCCCCAA GATTGCCCAG GACCGGCCCG GGCTGCCGGT CATCGTGATC
TCGGCGCAGA ATACGATCAT GACCGCCATC AAGGCTGCCG AAGCCGAAGC CTATGATTAT
CTGCCCAAAC CTTTTGACCT GCCTGAGCTG ATGAAGCGCA CGGCCAAGGC CCTCACCGAA
AAGCGCAGCG CCCAGAGCAC CAGCCATGTC GAGGTCGTCG AGGAGCGACC CGATGAGCTG
CCGCTGGTGG GGCGCACAGA GGTGATGCAG ACGCTCTATC GTCTGATTGC GCGGGTTATG
AACACCGATA TGCCGCTTTT GATCACGGGC GAGAGCGGGT CTGGGAAGTC CTTAATTGCC
AAGGCAATAC ACGATTTCTC GGACCGCAGG ACCCTGCCAT TTGTGGTCGC TGAGGCGTCT
GATCTCATCG AGCTTGAAGG CCCCTCGCGC CTGCTCAGTC AAGTGAAGGG CGGCACCTTG
CTGGTCGATG AGCTGGTTGA TCTGACCGAT GAGGCTCAGG CGCGGCTTGT GCGGATGATG
GATTCGCCCG GAGACCACGC ACCGCGCTTT ATTGCGACCT CCAGTCAGCA AGATCTTGCT
GAACAGATCG AAGCCGGCAA ACTGCGTCAG GATCTCTACT ACCGGATTTG CGGTACGGAG
CTTGCGGTGC CTGCGTTGCG CGAACGGGTC GAGGACATCG CACTTTTGTG TGAGCATTTC
CTGACCCGCG CGGACGCCGA AGGGGGGCCG CGACGCATGC TGAGCGACGA AGCGCGGGAT
CTCTTGCGGC ACTATTCTTG GCCTGGGAAC GTGCGTCAGC TTGAAAATAT CGTGAAAAGA
CTGGCGCTTA CAGCGCGCGG AGATACAATC AGCAAGTCAG AAGTCGCCGC AGCGCTTGGG
CCGCAGAGCA CCGGAGTTGC GCCCGTCATG GGGGGCGGGG CAAGCAATGA AAAGCTCTCC
GAATCTGTGG CGCGCCATCT GCAGCGATAT TTCGATCTGC ATGGCGACAT GCTGCCACCA
CCGGGGCTGT ATGCGCGGCT GCTGCGCGAA GTCGAAGCGC CGTTGATCGA GATCTCGCTT
GCTGCAACCG GCGGAAATCA GGCGAAATGT GCCGATCTCC TCGGGATCAA CCGAAATACG
CTGCGCAAGA AAATCACTGA TCTCGATATA GAGGTGACAC GCCGCCGCAA ACTGATGTAA
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| Protein sequence | MDGTVLVADD DRTIRTVLTQ ALTRAGCKVH ATSSLTTLMR WVGEGKGDVV ISDVMMPDGN
GLEMLPKIAQ DRPGLPVIVI SAQNTIMTAI KAAEAEAYDY LPKPFDLPEL MKRTAKALTE
KRSAQSTSHV EVVEERPDEL PLVGRTEVMQ TLYRLIARVM NTDMPLLITG ESGSGKSLIA
KAIHDFSDRR TLPFVVAEAS DLIELEGPSR LLSQVKGGTL LVDELVDLTD EAQARLVRMM
DSPGDHAPRF IATSSQQDLA EQIEAGKLRQ DLYYRICGTE LAVPALRERV EDIALLCEHF
LTRADAEGGP RRMLSDEARD LLRHYSWPGN VRQLENIVKR LALTARGDTI SKSEVAAALG
PQSTGVAPVM GGGASNEKLS ESVARHLQRY FDLHGDMLPP PGLYARLLRE VEAPLIEISL
AATGGNQAKC ADLLGINRNT LRKKITDLDI EVTRRRKLM
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