Gene TM1040_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1355 
Symbol 
ID4076372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1446786 
End bp1448057 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content60% 
IMG OID638006665 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_613350 
Protein GI99081196 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.427111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATG ACAGGAAGCA GACCCGGGCT TGGGTTCTGC ATCCGGATAT CAAGTCAGAT 
AGGGATCGTC GCGACGCAGT TCCGGCGCTA GAGGAAGGTG TGGCGCTCGC CGCCGCACTG
CCCGACCTTG AAGTGGTCGG CTCAACTGTC GTGGGCCTTC CCAAGGCGCA TCCCGGTATG
CTGTTTGGCT CCGGCAAGAT CGAAGAGCTG AAGACCCTGT TCAAAGCCGA AGAGGTCGAA
CTGGTCTTGA TTGACGGCCC CGTAAGCCCG GTCCAGCAGC GCAACCTCGA AAAAGCCTGG
AAGGTCAAAA TTCTTGACCG AACCGGGCTT ATTCTCGAGA TCTTCTCGGA TCGTGCGCGC
ACCCGTGAGG GCGTGCTGCA GGTTGAAATG GCAGCGCTCA GCTATCAGCG CACGCGACTG
GTGCGTGCCT GGACCCACCT AGAGCGTCAG CGTGGTGGTC TTGGCTTTGT CGGCGGCCCC
GGCGAAACCC AGATCGAAGC GGACCGCCGC GCCATCGACG AACAGCTTGT CCGACTGCGG
CGACAACTCG ACAAGGTTGT GAAAACGCGT ACGCTGCATC GCGCCGCGCG CGCCAAAGTG
CCTTATCCGA TTGTTGCGCT TGTGGGATAT ACCAACGCTG GAAAATCCAC TCTGTTCAAT
CGTCTGACCG GGGCAGAGGT GATGGCGAAA GACATGCTCT TTGCCACGCT GGACCCCACC
ATGCGCCGCG TTGAGCTGCC GGATGGGCCA GAAGTCATCC TCTCGGACAC CGTGGGATTC
ATCTCTGATC TTCCGACCGA ACTGGTTGCC TCGTTTCGCG CGACGCTCGA AGAGGTGCTG
GCCGCAGATG TGATCCTACA TGTGCGCGAC ATCAGCCACA GCGACACCGA ACATCAGGCC
GAAGACGTGG AGCAGATCCT GAGCTCGCTT GGAGTGGACG AGGACCGCAC GGTCATCGAG
GTCTGGAACA AGATCGACCA GCTCTCCGAG GAAGAGGCGG ATGCCTGCCG CCAACGGGCA
GACCGCAACG ACTCGCTCTA CGCGATTTCC GCGATAACCG GCGAGGGGCT GCCTCAACTG
TTGCACGACA TTGCCATGAA GCTTCAGGGC GTGCGTGTGG ATGAGGTACT GACGCTGGAC
TTTTCCCAAG GAAAACAGCG CGCCTGGCTC TTCAAACAAG ACGTTGTGCA AGAGGAAAAC
CAGACCGACA CCGGGTTTGA GATTTCCGTG CGCTGGACCG AAAAGCAAAA AGCACAATAC
GCAGCGCTCT AG
 
Protein sequence
MEHDRKQTRA WVLHPDIKSD RDRRDAVPAL EEGVALAAAL PDLEVVGSTV VGLPKAHPGM 
LFGSGKIEEL KTLFKAEEVE LVLIDGPVSP VQQRNLEKAW KVKILDRTGL ILEIFSDRAR
TREGVLQVEM AALSYQRTRL VRAWTHLERQ RGGLGFVGGP GETQIEADRR AIDEQLVRLR
RQLDKVVKTR TLHRAARAKV PYPIVALVGY TNAGKSTLFN RLTGAEVMAK DMLFATLDPT
MRRVELPDGP EVILSDTVGF ISDLPTELVA SFRATLEEVL AADVILHVRD ISHSDTEHQA
EDVEQILSSL GVDEDRTVIE VWNKIDQLSE EEADACRQRA DRNDSLYAIS AITGEGLPQL
LHDIAMKLQG VRVDEVLTLD FSQGKQRAWL FKQDVVQEEN QTDTGFEISV RWTEKQKAQY
AAL