Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1355 |
Symbol | |
ID | 4076372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1446786 |
End bp | 1448057 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006665 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_613350 |
Protein GI | 99081196 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.427111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCATG ACAGGAAGCA GACCCGGGCT TGGGTTCTGC ATCCGGATAT CAAGTCAGAT AGGGATCGTC GCGACGCAGT TCCGGCGCTA GAGGAAGGTG TGGCGCTCGC CGCCGCACTG CCCGACCTTG AAGTGGTCGG CTCAACTGTC GTGGGCCTTC CCAAGGCGCA TCCCGGTATG CTGTTTGGCT CCGGCAAGAT CGAAGAGCTG AAGACCCTGT TCAAAGCCGA AGAGGTCGAA CTGGTCTTGA TTGACGGCCC CGTAAGCCCG GTCCAGCAGC GCAACCTCGA AAAAGCCTGG AAGGTCAAAA TTCTTGACCG AACCGGGCTT ATTCTCGAGA TCTTCTCGGA TCGTGCGCGC ACCCGTGAGG GCGTGCTGCA GGTTGAAATG GCAGCGCTCA GCTATCAGCG CACGCGACTG GTGCGTGCCT GGACCCACCT AGAGCGTCAG CGTGGTGGTC TTGGCTTTGT CGGCGGCCCC GGCGAAACCC AGATCGAAGC GGACCGCCGC GCCATCGACG AACAGCTTGT CCGACTGCGG CGACAACTCG ACAAGGTTGT GAAAACGCGT ACGCTGCATC GCGCCGCGCG CGCCAAAGTG CCTTATCCGA TTGTTGCGCT TGTGGGATAT ACCAACGCTG GAAAATCCAC TCTGTTCAAT CGTCTGACCG GGGCAGAGGT GATGGCGAAA GACATGCTCT TTGCCACGCT GGACCCCACC ATGCGCCGCG TTGAGCTGCC GGATGGGCCA GAAGTCATCC TCTCGGACAC CGTGGGATTC ATCTCTGATC TTCCGACCGA ACTGGTTGCC TCGTTTCGCG CGACGCTCGA AGAGGTGCTG GCCGCAGATG TGATCCTACA TGTGCGCGAC ATCAGCCACA GCGACACCGA ACATCAGGCC GAAGACGTGG AGCAGATCCT GAGCTCGCTT GGAGTGGACG AGGACCGCAC GGTCATCGAG GTCTGGAACA AGATCGACCA GCTCTCCGAG GAAGAGGCGG ATGCCTGCCG CCAACGGGCA GACCGCAACG ACTCGCTCTA CGCGATTTCC GCGATAACCG GCGAGGGGCT GCCTCAACTG TTGCACGACA TTGCCATGAA GCTTCAGGGC GTGCGTGTGG ATGAGGTACT GACGCTGGAC TTTTCCCAAG GAAAACAGCG CGCCTGGCTC TTCAAACAAG ACGTTGTGCA AGAGGAAAAC CAGACCGACA CCGGGTTTGA GATTTCCGTG CGCTGGACCG AAAAGCAAAA AGCACAATAC GCAGCGCTCT AG
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Protein sequence | MEHDRKQTRA WVLHPDIKSD RDRRDAVPAL EEGVALAAAL PDLEVVGSTV VGLPKAHPGM LFGSGKIEEL KTLFKAEEVE LVLIDGPVSP VQQRNLEKAW KVKILDRTGL ILEIFSDRAR TREGVLQVEM AALSYQRTRL VRAWTHLERQ RGGLGFVGGP GETQIEADRR AIDEQLVRLR RQLDKVVKTR TLHRAARAKV PYPIVALVGY TNAGKSTLFN RLTGAEVMAK DMLFATLDPT MRRVELPDGP EVILSDTVGF ISDLPTELVA SFRATLEEVL AADVILHVRD ISHSDTEHQA EDVEQILSSL GVDEDRTVIE VWNKIDQLSE EEADACRQRA DRNDSLYAIS AITGEGLPQL LHDIAMKLQG VRVDEVLTLD FSQGKQRAWL FKQDVVQEEN QTDTGFEISV RWTEKQKAQY AAL
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