| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1353 |
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| Symbol | |
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| ID | 4076370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1443294 |
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| End bp | 1444166 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006663 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_613348 |
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| Protein GI | 99081194 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.478456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA TTGCGTTCCT TGGGCTCGGG GTCATGGGGT ATCCGATGGC CGGGCATCTG
CAAAAGGCCG GGCATGAGGT CACGGTTTAC AACCGCACAA CTGCAAAGGC CGAAGGCTGG
GCGGCAGCGA CGGGCGGTCG GTCTGCGCCA ACGCCCAGAG AGGCCGCACA AAACGCGGAT
TTTGTCATGG CCTGTGTGGG CAATGACGAT GATTTGCGCT CTGTTTGCCT AGGTGAGGAC
GGTGCCTTTG CCGGAATGAA ACCGGGTGCG ATCTTTGTCG ATCACACCAC GGTATCAGCA
GAGGTCACGG CAGAGCTCTA CGCCCGCGCC AAAGACGCGC AGCTTGGGTT TGTCGACGCT
CCGATCTCGG GCGGTCAGGC GGGGGCCGAG AATGGGGTTC TTTCGGTGAT GTGCGGCGGG
GATGCTGCGG ATTACGACAA AGCTGCGCCA GTGATGGAAG CCTATGCACG GATCTGCCGG
CGCATCGGTG AAAGTGGCGC AGGCCAGATG ACCAAAATGT GCAACCAGAT CGCCATTGCC
GGCCTTGTGC AAGGTTTGAG CGAAGCGCTT CATTTTGCGG AGAAAGCCGG GCTCGACGGG
CGCGCGGTGG TCGAGGTGAT CAGTCAGGGG GCAGCGGGCA GCTGGCAGAT GGCAAATCGC
TATGAGACCA TGCTCGACGA TGAGTTCGAG CACGGGTTTG CCGTGGACTG GATGCGCAAG
GATCTCGGAA TCTGCCTTGA TACCGCCGAC GACATTGGCG CAAGCCTGCC TGTCACGGCC
TTGGTCGATC AGTTCTACAA GGACGTTCAA AAACTGGGCG GCGGGCGTTG GGACACCTCA
TCCCTGATCA AACGGCTGCG GGCCTTGGGC TGA
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| Protein sequence | MAKIAFLGLG VMGYPMAGHL QKAGHEVTVY NRTTAKAEGW AAATGGRSAP TPREAAQNAD
FVMACVGNDD DLRSVCLGED GAFAGMKPGA IFVDHTTVSA EVTAELYARA KDAQLGFVDA
PISGGQAGAE NGVLSVMCGG DAADYDKAAP VMEAYARICR RIGESGAGQM TKMCNQIAIA
GLVQGLSEAL HFAEKAGLDG RAVVEVISQG AAGSWQMANR YETMLDDEFE HGFAVDWMRK
DLGICLDTAD DIGASLPVTA LVDQFYKDVQ KLGGGRWDTS SLIKRLRALG
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