Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1352 |
Symbol | |
ID | 4076369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1442665 |
End bp | 1443237 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006662 |
Product | twin-arginine translocation pathway signal sequence domain-containing protein |
Protein accession | YP_613347 |
Protein GI | 99081193 |
COG category | [S] Function unknown |
COG ID | [COG2930] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAT CCAAATCCCG TCTTTCCCGT CGTGCGTTTA CCGCCAGCGG ACTCGCGGCC ATTGGGGCCA CCGCAGCATG CAGCAACGGG ATCGGCAACA CCAATGACGT GAAAATCGAC GCCCGCGTCA ATGCCACCCT CAATCAGATG TATGACCGCT ATCCCGGCAC CCGCGATCTG GCACAGAAAT CTGCCGGTAT GCTGGTGATG CCCCTCGTCA CCGAGGCGGG CTTTATCTTT GGTGGCGCCT ATGGGCGCGG CGCGCTGCGG ATCAATGGCG CCACGGTTGA CTATTATGCC GCCCTCAAGG GCAACGCCGG TCTGCAGCTG GGCGCGCAGC AATATTCCCA TGTCTTGTTC TTTATGACCG ACGCCGCGCT GGCGCGGTTC CGCCGCTCGT CGGGTTGGAC GGCCGGTGCA GATCTTGAGT ATGTGGTCAT CGACGAAGGC GACGCACTGA CGGCGGATAC AAATACGCTG ACGGCGCCTG TGGTTGCTGC AGTCTTTGGT CAGGCCGGGA TTCGGATCGG AGCCACCATC GAGGGCTCCA AATACACACG TATCATTCCC TGA
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Protein sequence | MSTSKSRLSR RAFTASGLAA IGATAACSNG IGNTNDVKID ARVNATLNQM YDRYPGTRDL AQKSAGMLVM PLVTEAGFIF GGAYGRGALR INGATVDYYA ALKGNAGLQL GAQQYSHVLF FMTDAALARF RRSSGWTAGA DLEYVVIDEG DALTADTNTL TAPVVAAVFG QAGIRIGATI EGSKYTRIIP
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