Gene TM1040_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1352 
Symbol 
ID4076369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1442665 
End bp1443237 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID638006662 
Producttwin-arginine translocation pathway signal sequence domain-containing protein 
Protein accessionYP_613347 
Protein GI99081193 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT CCAAATCCCG TCTTTCCCGT CGTGCGTTTA CCGCCAGCGG ACTCGCGGCC 
ATTGGGGCCA CCGCAGCATG CAGCAACGGG ATCGGCAACA CCAATGACGT GAAAATCGAC
GCCCGCGTCA ATGCCACCCT CAATCAGATG TATGACCGCT ATCCCGGCAC CCGCGATCTG
GCACAGAAAT CTGCCGGTAT GCTGGTGATG CCCCTCGTCA CCGAGGCGGG CTTTATCTTT
GGTGGCGCCT ATGGGCGCGG CGCGCTGCGG ATCAATGGCG CCACGGTTGA CTATTATGCC
GCCCTCAAGG GCAACGCCGG TCTGCAGCTG GGCGCGCAGC AATATTCCCA TGTCTTGTTC
TTTATGACCG ACGCCGCGCT GGCGCGGTTC CGCCGCTCGT CGGGTTGGAC GGCCGGTGCA
GATCTTGAGT ATGTGGTCAT CGACGAAGGC GACGCACTGA CGGCGGATAC AAATACGCTG
ACGGCGCCTG TGGTTGCTGC AGTCTTTGGT CAGGCCGGGA TTCGGATCGG AGCCACCATC
GAGGGCTCCA AATACACACG TATCATTCCC TGA
 
Protein sequence
MSTSKSRLSR RAFTASGLAA IGATAACSNG IGNTNDVKID ARVNATLNQM YDRYPGTRDL 
AQKSAGMLVM PLVTEAGFIF GGAYGRGALR INGATVDYYA ALKGNAGLQL GAQQYSHVLF
FMTDAALARF RRSSGWTAGA DLEYVVIDEG DALTADTNTL TAPVVAAVFG QAGIRIGATI
EGSKYTRIIP