| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1345 |
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| Symbol | |
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| ID | 4075916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1432942 |
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| End bp | 1433571 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006655 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_613340 |
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| Protein GI | 99081186 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.200207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAC GCGACCCGAA GAAACTCATC TCTATCGCGC ACGCCAATGG CGATCAAAGC
GCGCCCGAAG CATTAGATCT GGGCGCGCGT GTGCGCGAGC TGCGCAAGCA GCGGGACTGG
ACACTCGAAC ATGCCGCCAG CCAGGCCGGA CTTGCGCGAT CCACTTTGTC CAAGATCGAA
AACGGCCAGA TGTCGCCGAC CTATGACGCG CTCAAGAAGC TGGCGGTCGG CCTGCAGATT
TCCGTGCCGC AGCTGTTTAC GCCGCCGCAG CGCGATCAGG TCAATGGCCG CATGATCGTG
ACCAAATTCG GCGAGGGCTC TGCGCATGCC ACGGCAACCT ACGAGCATGA ACTGCTGGCA
GATGGGCTGA CACGCAAGAA CATGCTGCCC TATCGCGCCC GTGTGCGCGC GCGCTCCATG
GATGAATTTG ATGGCTGGGT GCGCCATGAC GGCGAGGAAT TTATGTATGT CCTGACGGGG
GTCGTCAAAC TCTATACAGA GTTTTACGAA CCCGTGGAGA TGCGCCGAGG CGACAGCGCC
TATTATGACG GCGCCATGGG GCACAATGTG ATCTCGGTCA GTTCCGAAGA CGCGACTATT
CTCTGGGTGA CATCGCTCAA TCAGATGTGA
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| Protein sequence | MQERDPKKLI SIAHANGDQS APEALDLGAR VRELRKQRDW TLEHAASQAG LARSTLSKIE
NGQMSPTYDA LKKLAVGLQI SVPQLFTPPQ RDQVNGRMIV TKFGEGSAHA TATYEHELLA
DGLTRKNMLP YRARVRARSM DEFDGWVRHD GEEFMYVLTG VVKLYTEFYE PVEMRRGDSA
YYDGAMGHNV ISVSSEDATI LWVTSLNQM
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