| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1342 |
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| Symbol | |
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| ID | 4075913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1429486 |
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| End bp | 1430259 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006652 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_613337 |
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| Protein GI | 99081183 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCA AAGGTAAAAC CGCAGTGATC ACCGGGTCCA ATTCCGGAAT CGGTCTGGGT
GTCGCCCGGG AATTGGCCAA GGCTGGCGCC AATGTTGTGT TGAACTCTTT CACCGATCGC
GATGAAGACC ACGCCATCGC CGCCGAGATC GGCAAGGAAT TTGGAGTGGA GGCGCGTTAT
ATTCAGGCGG ATATGTCCAA AGCGGAGCAA TGCCGCGCGC TGATCGAGAC GGCGGGCCAA
TGCGATATTC TTGTGAACAA TGCCGGCATC CAGCATGTTG CCCCGATTGA CAGCTTCCCC
ACCGAAAAAT GGGACGCGAT CATTGCGATC AACCTCACCT CTGCGTTTCA CACCACGGCG
GCGGCCCTGC CGATGATGCG CGCGGCCGGT TGGGGCAGGG TGGTAAACAT CGCCTCGGCC
CATGGGCTGA CGGCCTCTCC CTATAAATCG GCCTATGTCG CGGCCAAACA CGGGATTGTG
GGCATGACAA AAACCGTTGC GCTTGAGACC GCCGAAGAGC CTATCACCTG CAACGCGGTC
TGTCCGGGTT ATGTGCTGAC CCCATTGGTG GAGGCGCAAA TCCCTGACAC CATGGAGAAA
TACAACATGG GGCGCGAAGA GGTCATCAAG AAGGTGATGC TCGAACGCCA GCCCTCGCGA
GAGTTTGCCA CCGTCGAACA ACTGGGCGGG ACCGTGAATT TCCTCTGCTC GGATGCGGCC
AAGCAAATCA CCGGAACCAC CATCAGCGTC GACGGCGGCT GGACCGCACT CTGA
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| Protein sequence | MSVKGKTAVI TGSNSGIGLG VARELAKAGA NVVLNSFTDR DEDHAIAAEI GKEFGVEARY
IQADMSKAEQ CRALIETAGQ CDILVNNAGI QHVAPIDSFP TEKWDAIIAI NLTSAFHTTA
AALPMMRAAG WGRVVNIASA HGLTASPYKS AYVAAKHGIV GMTKTVALET AEEPITCNAV
CPGYVLTPLV EAQIPDTMEK YNMGREEVIK KVMLERQPSR EFATVEQLGG TVNFLCSDAA
KQITGTTISV DGGWTAL
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