| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1332 |
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| Symbol | |
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| ID | 4075903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1418119 |
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| End bp | 1420857 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006642 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_613327 |
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| Protein GI | 99081173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATA CGCCGGAAAC CCCTGAAAAC CCTGACGAAA ACCTACCTCA GCGTCCATCA
TACGATGGTC CGACGGTCTC CATCGAATCC GAGATGCGCA ACTCGTATCT CGACTATGCG
ATGTCGGTCA TCGTCAGTCG CGCCATCCCC GATCTTCGGG ATGGTCTGAA GCCGGTCCAC
CGCCGGATCC TCTATGCGAT GCATGAGACC GGAAACAGCC ACGACAAGGC CTACCGCAAG
TCGGCGCGTC CCGTTGGCGA CGTGATGGGT AAGTACCACC CGCATGGCGA CAGCGCGATC
TATGACGCCC TTGTCCGTAT GGCGCAGGAC TTCTCCATGT CCCTGCCGCT GCTGGACGGC
CAGGGCAACT TTGGCTCCAT GGACGGCGAT AACCCGGCTG CGATGCGCTA TACCGAAGTG
CGCATGGACA AGCCTGCGGC CTTCATGCTC GCCGATATCG AAAAAGAAAC GGTTGATTTT
CAGGACAACT ACGACGGCAA GGACAAGGAA CCCACTGTTC TGCCAGCACG TTTCCCGAAT
ATGCTGGTCA ATGGCGCCGG GGGTATCGCG GTGGGGATGG CCACCAATAT TCCGCCGCAC
AACCTTGGCG AAGTGGTGGA TGCGACGCTT GCGCTGATCG AAGATCCCGA TCTGACATCC
GAGCAGCTCA TCGAATATGT GCCGGGACCG GATTTTCCGA CCGGCGGCGT GATGCTGGGC
CGATCGGGAG CGCGCAAAGC CTATCTTGAG GGGCGCGGCA GCGTCATCAT TCGCGCAAAA
ACCCGCGTCG AAGAGATCAG GAAAGATCGC TATGCTATTG TAGTTGATGA GATTCCCTAT
CAGGTCAACA AAGCGTCCAT GATCGAGAAA ATCGCCGAAC AGGTGCGAGA GAAGCGCATC
GAAGGCGTGG CACATGTGCA GGACGAGTCC GACCGCAACG GTGTGCGCGT GGTCGTCGAA
CTGAAGCGCG ACGCGACACC CGAGGTGGTT CTGAACCAGC TTTATCGCTT TACGCCGATG
CAGACCTCTT TTGGCTGCAA CATGCTGGCG CTGAACGGCG GTCGCCCCGA GCAGCTGACC
CTGCGCAAAT TCCTTACATC TTTCATCGAC TTCCGCGAGG ATGTTGTCGC ACGTCGCACC
GCGTATAACC TGCGCAAGGC ACGCGAGCGC AGCCACATCC TGTGTGGCTT GGCGGTGGCA
GTGTCCAACG TCGATGAGGT CGTCGCCACC ATCCGCTCCT CTGCGGATGC GGCCGAGGCC
CGTCACAAGC TGATGACTCG TCGCTGGCCT GCGGCAGATA TTGCCGGCTA CATTCGCCTG
ATCGATGATC CGACCCACAC GATGAACGAC GACGGGACCT ATAACCTCTC TGAGGTACAG
GCCCGCGCGA TCCTCGAACT CCGGCTGCAA CGCCTCACCC AACTGGGGGT CAAGGAAGTC
ACCGACGAGC TTGAAGAACT GGCAGGTAAA ATCAAGGAAT ACCTTGAGAT TCTATCGTCA
CGCGAACGTA TCATGAGCAT CATCGCCGAT GAGCTTGCCG AGGTCCGCGA GAGCTTTGCC
GTGCCGCGTC GCACCGAGAT CGTCGACTGG TCCGGCGACA TGGAGGACGA GGATCTGATC
GAGCGCGAGG ACATGGTCGT GACCGTGACC TCTGGTGGCT ACATCAAGCG TACGCCGCTC
GCCGATTTCC GCGCCCAGAA ACGTGGCGGC AAAGGGCTGT CCGGGATGCA GACCAAAGAA
GAGGATGTGG TGACCACGCT CTTTGTGGCG AATACCCACA CGCAGCTTCT GTTCTTTACC
ACCGACGGGA TGGTTTACAA GCTTAAGACC TGGCGCCTGC CGCAAGGGGG ACGGACCTCC
AAGGGCAAGG CGATCGTCAA CATTCTGCCA ATCCCCACGG GCGTCTCCAT CGCGGCGATC
ATGCCAGTCG ATCGGGATGA AAAGGAATGG GATGATCTGC AGATCATGTT CGCGACCTCT
GCTGGAACTG TGCGTCGTAA CCGGTTGTCC GACTTCACAA ATGTGATGCG CAACGGCAAG
ATCGCGATGA AGTTCGAGGA TGAGAACCAA GGCACCAAGC TGATCAATGC GCGCATCTGC
TCGGAAGATG ACGACATCAT GCTGGTGACC AATACCGGTC GCGCGATCCG CTTCCCTACC
ACTGAGGTGC GCGTCTTCAA CTCTCGCAAC TCGGTCGGTG TACGCGGGAT CAAGCTTGGC
GAGGACGACG AGGTTGTCTC CATGTCGGTG ATCCGTCACT CGAAATACAC GCCCGAGCAG
CGCTCCGCCT ATCTCAAGAT GCGTCGCGCC ATGGCGGGTC TGACGGATGA GGATGCCTCT
GACGAGGATG CGGTTGAGGA TCCGAATTTC TCTACCGAGC TCTTTGCAGA GATGTCTGCG
GCGGAAAACC TGATCCTGAC CATTACTGCA GGCGGGTCCG GTAAGCTCTC GTCCAGTCAC
GATTATCCTG TGCGCGGGCG TGGCGGAATG GGCGTCACCG CGATGGACAA AGCCATGCGC
GGCGGGGCAT TGGTGGCCTC CTTCCCGGTA GAACTGGATG ACCAGATCAT GCTGGCAACA
TCCAAGGGGC AGTCGATCCG CGTGCCGGTT GATGGCATTT CCTTCCGGTC TCGTTCTGCG
GGCGGCGTGC GGATCTTCAA CACCGGTAAG GGTGAAGAGG TCGTCTCGGT CGCTTGGATT
GCGGACAACG GTGACGACGA AGAAACCGTG GAAGAATAA
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| Protein sequence | MSDTPETPEN PDENLPQRPS YDGPTVSIES EMRNSYLDYA MSVIVSRAIP DLRDGLKPVH
RRILYAMHET GNSHDKAYRK SARPVGDVMG KYHPHGDSAI YDALVRMAQD FSMSLPLLDG
QGNFGSMDGD NPAAMRYTEV RMDKPAAFML ADIEKETVDF QDNYDGKDKE PTVLPARFPN
MLVNGAGGIA VGMATNIPPH NLGEVVDATL ALIEDPDLTS EQLIEYVPGP DFPTGGVMLG
RSGARKAYLE GRGSVIIRAK TRVEEIRKDR YAIVVDEIPY QVNKASMIEK IAEQVREKRI
EGVAHVQDES DRNGVRVVVE LKRDATPEVV LNQLYRFTPM QTSFGCNMLA LNGGRPEQLT
LRKFLTSFID FREDVVARRT AYNLRKARER SHILCGLAVA VSNVDEVVAT IRSSADAAEA
RHKLMTRRWP AADIAGYIRL IDDPTHTMND DGTYNLSEVQ ARAILELRLQ RLTQLGVKEV
TDELEELAGK IKEYLEILSS RERIMSIIAD ELAEVRESFA VPRRTEIVDW SGDMEDEDLI
EREDMVVTVT SGGYIKRTPL ADFRAQKRGG KGLSGMQTKE EDVVTTLFVA NTHTQLLFFT
TDGMVYKLKT WRLPQGGRTS KGKAIVNILP IPTGVSIAAI MPVDRDEKEW DDLQIMFATS
AGTVRRNRLS DFTNVMRNGK IAMKFEDENQ GTKLINARIC SEDDDIMLVT NTGRAIRFPT
TEVRVFNSRN SVGVRGIKLG EDDEVVSMSV IRHSKYTPEQ RSAYLKMRRA MAGLTDEDAS
DEDAVEDPNF STELFAEMSA AENLILTITA GGSGKLSSSH DYPVRGRGGM GVTAMDKAMR
GGALVASFPV ELDDQIMLAT SKGQSIRVPV DGISFRSRSA GGVRIFNTGK GEEVVSVAWI
ADNGDDEETV EE
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