| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1322 |
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| Symbol | |
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| ID | 4078365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1407723 |
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| End bp | 1408715 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638006630 |
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| Product | ankyrin |
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| Protein accession | YP_613317 |
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| Protein GI | 99081163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0666] FOG: Ankyrin repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.275224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAATT GTGCCGTTGT GATAAATTCC TGGGAAAGTG CAGCTGTGCA GAAAACATAC
TTGGGCCTAT TTTTATCCTG TGCTTTTTCA GCCAGTGCAT CCGCCTGCGA AGTCGATGCT
GAATTTGTGA GAGAGAGTAA CAGCGAAACG CTGATCGCCT GCCTGGAAGG ATCGGAGAGT
GATGAGTTTC TGAATGGACG AAACTCCGAA CTCGCTACCG TTTTGCATTT AGCCGTCGAA
ACAGAGAAGA ACCACCTCGT GCTTGATGCA ATACGTCGAG CCGCAGGCGA GGAGGGCTGG
CAGAACTTAC GAGACCGCTT GGATAATGCC GGGCGCACGG CACTGCACAT TGCTACCGAG
ACTGGTGAAA CCGCCGAAAC CGTCCGCTGG CTTTTGGCTT GGGGTGCGGA TCCAAATGCG
AGGTATGCGG TCGAAAATCG GTGGAATCCC TTGTCCTCGG ACTACGGAAT TACGCCACTC
CACTTAGCCG TAATGCGCCC CAACAGCGCG GATGTTGTCT CGGCACTAAT GGCAGGTGGT
GCTGATCCGT CGATAGCTCG CCCGATCGAG TCGAATGCAG ACAAATACTA TTGGCCTGCT
TTCCTGGTCG CGAGCCGTCA TGCCGAGGAC CTGCGGGTCC TGACTGCCTT CGCGGCCGGT
GGAGGGGACC TGAGTGTTGT TTCAAACGAT GACAACAATG CGCTGCATGT TGCGGCGGGC
TGGGACCGGC CGAGTGGCGT GATCCGTTTT CTCCTTGAAA AGGGAGTAGA TGCCAACGCG
ACTAACAATG AAGGTCAGAC ACCTCTGCAT CTCGCTGCTC GTTACTCATC CAAACCGGAA
ACTGTGGCGA GCCTCCTCGA AGCTATGGAC GACCCGTGCG CCGCAGACAC AAAGGAGCGT
ACCGCACGCG AGTTGCTTAA AGTGAATGAG GCTATCGCCG GGGACCATGC GCTAGATCTC
CGGTTTCATG AGATCTGCGT CGAAGGGAAT TGA
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| Protein sequence | MSNCAVVINS WESAAVQKTY LGLFLSCAFS ASASACEVDA EFVRESNSET LIACLEGSES
DEFLNGRNSE LATVLHLAVE TEKNHLVLDA IRRAAGEEGW QNLRDRLDNA GRTALHIATE
TGETAETVRW LLAWGADPNA RYAVENRWNP LSSDYGITPL HLAVMRPNSA DVVSALMAGG
ADPSIARPIE SNADKYYWPA FLVASRHAED LRVLTAFAAG GGDLSVVSND DNNALHVAAG
WDRPSGVIRF LLEKGVDANA TNNEGQTPLH LAARYSSKPE TVASLLEAMD DPCAADTKER
TARELLKVNE AIAGDHALDL RFHEICVEGN
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