Gene TM1040_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1320 
Symbol 
ID4078363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1405803 
End bp1406438 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID638006628 
Productputative phage repressor 
Protein accessionYP_613315 
Protein GI99081161 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.260786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA CTTTTCGGGA CGCATTTCTT GCGGCTATCA AAACCACCGG CAAATCTATG 
CGACAGGTCG CTCTGGACGC AGGCGTTTCC TATGAGCAAC TCAAAAATCT TTCGCAGGGC
AAGAGTAAGT CGACAAACGT TGACGATGCC ATCCGCATAG CTGCATCTTT CGGGACCAAC
CTCGAAAACT TCTTGGAAGG GAATACCGCA CCCTCTGTGC GCCCGACTAT CTCGATCGCG
GGCACAGTTG GCGCGGGGGC GCAGGTTCCG GTGTTCGATG CCTACCCGAA AGGCGGTGGC
CCGCAGGTGG AGTGCCCTCC GGGCCTGTCT CCGCATGGCA TCGTTGCTGT TGAGGTTGAG
GGAGACAGTA TGGAGCCCGT TTATTCGGAC AGGGACTTGT TGTTTTACAG CCGAAACGGT
CACGACAGCG TTCCATCGGA CATCATCGGG CATCGCTGTG TCTGCGAAGA CGAGGACGGC
ATGGGGTGGG TCAAACAAGT AAAGGCCGGG GACGAACCCG GCCTATTTCA TCTTATTTCA
TTGAATCCCG GCGCGAACAA CATCTGGAAC GTGCGTCTGA AGTGGGCGGC TCGGGTCCAA
CTGCACTGGC CAGCCGACTT GGCGAAAAAG GCATGA
 
Protein sequence
MQQTFRDAFL AAIKTTGKSM RQVALDAGVS YEQLKNLSQG KSKSTNVDDA IRIAASFGTN 
LENFLEGNTA PSVRPTISIA GTVGAGAQVP VFDAYPKGGG PQVECPPGLS PHGIVAVEVE
GDSMEPVYSD RDLLFYSRNG HDSVPSDIIG HRCVCEDEDG MGWVKQVKAG DEPGLFHLIS
LNPGANNIWN VRLKWAARVQ LHWPADLAKK A