Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1320 |
Symbol | |
ID | 4078363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1405803 |
End bp | 1406438 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638006628 |
Product | putative phage repressor |
Protein accession | YP_613315 |
Protein GI | 99081161 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.260786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA CTTTTCGGGA CGCATTTCTT GCGGCTATCA AAACCACCGG CAAATCTATG CGACAGGTCG CTCTGGACGC AGGCGTTTCC TATGAGCAAC TCAAAAATCT TTCGCAGGGC AAGAGTAAGT CGACAAACGT TGACGATGCC ATCCGCATAG CTGCATCTTT CGGGACCAAC CTCGAAAACT TCTTGGAAGG GAATACCGCA CCCTCTGTGC GCCCGACTAT CTCGATCGCG GGCACAGTTG GCGCGGGGGC GCAGGTTCCG GTGTTCGATG CCTACCCGAA AGGCGGTGGC CCGCAGGTGG AGTGCCCTCC GGGCCTGTCT CCGCATGGCA TCGTTGCTGT TGAGGTTGAG GGAGACAGTA TGGAGCCCGT TTATTCGGAC AGGGACTTGT TGTTTTACAG CCGAAACGGT CACGACAGCG TTCCATCGGA CATCATCGGG CATCGCTGTG TCTGCGAAGA CGAGGACGGC ATGGGGTGGG TCAAACAAGT AAAGGCCGGG GACGAACCCG GCCTATTTCA TCTTATTTCA TTGAATCCCG GCGCGAACAA CATCTGGAAC GTGCGTCTGA AGTGGGCGGC TCGGGTCCAA CTGCACTGGC CAGCCGACTT GGCGAAAAAG GCATGA
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Protein sequence | MQQTFRDAFL AAIKTTGKSM RQVALDAGVS YEQLKNLSQG KSKSTNVDDA IRIAASFGTN LENFLEGNTA PSVRPTISIA GTVGAGAQVP VFDAYPKGGG PQVECPPGLS PHGIVAVEVE GDSMEPVYSD RDLLFYSRNG HDSVPSDIIG HRCVCEDEDG MGWVKQVKAG DEPGLFHLIS LNPGANNIWN VRLKWAARVQ LHWPADLAKK A
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