Gene TM1040_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1313 
Symbol 
ID4078356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1401814 
End bp1402140 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID638006621 
Producthypothetical protein 
Protein accessionYP_613308 
Protein GI99081154 
COG category[S] Function unknown 
COG ID[COG3750] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.214688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGA CCCAAGCCTC GAAGGTGAGT TCCCTTCCGA TGCGGGAGAC CGAGGCGGAT 
AGGGCCGTCC GGGAGGGGGC AGAGAGTGCC GCATATCGCG CCACAGCGAG CGAGCTCCGG
CAGTTTGTGG AACGCTTCGA GCGCCTGGAA GAAGAGAAGA AGGCCATTGC TGAGCAACAG
AAAGAGGTCA TGGCCGAGGC CAAAGGCCGG GGATATGACG TCAAGGTATT GAGAAAGCTG
ATCGCCCTGC GCAAACGCGA CGCCGATGAC ATCGCCGAGG AAGAGGCCGT TCTCGCACTC
TATAAAGAAT GCTTGGGAAT GGGGTGA
 
Protein sequence
MAATQASKVS SLPMRETEAD RAVREGAESA AYRATASELR QFVERFERLE EEKKAIAEQQ 
KEVMAEAKGR GYDVKVLRKL IALRKRDADD IAEEEAVLAL YKECLGMG