Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1313 |
Symbol | |
ID | 4078356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1401814 |
End bp | 1402140 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006621 |
Product | hypothetical protein |
Protein accession | YP_613308 |
Protein GI | 99081154 |
COG category | [S] Function unknown |
COG ID | [COG3750] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.214688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGA CCCAAGCCTC GAAGGTGAGT TCCCTTCCGA TGCGGGAGAC CGAGGCGGAT AGGGCCGTCC GGGAGGGGGC AGAGAGTGCC GCATATCGCG CCACAGCGAG CGAGCTCCGG CAGTTTGTGG AACGCTTCGA GCGCCTGGAA GAAGAGAAGA AGGCCATTGC TGAGCAACAG AAAGAGGTCA TGGCCGAGGC CAAAGGCCGG GGATATGACG TCAAGGTATT GAGAAAGCTG ATCGCCCTGC GCAAACGCGA CGCCGATGAC ATCGCCGAGG AAGAGGCCGT TCTCGCACTC TATAAAGAAT GCTTGGGAAT GGGGTGA
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Protein sequence | MAATQASKVS SLPMRETEAD RAVREGAESA AYRATASELR QFVERFERLE EEKKAIAEQQ KEVMAEAKGR GYDVKVLRKL IALRKRDADD IAEEEAVLAL YKECLGMG
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