| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1299 |
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| Symbol | |
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| ID | 4078498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1390120 |
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| End bp | 1392111 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006607 |
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| Product | peptidase U35, phage prohead HK97 |
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| Protein accession | YP_613294 |
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| Protein GI | 99081140 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.284846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCGCG AAGTCACAGC GGAGCAGATC AACGCGCGCG GCGAGGGCGG TGCGATGCGC
CGCATGGGAG AGGTGCGCGA AATCAACGTC GAGGCGCGCA CTGTCGAGCT TGCCTTCTCG
AGCACGACCC CGGTGCGGCG CTGGTTTGGC GATGAGGTGC TTTCCCATGA CGCCGAGGCC
GTGGTTCTGG ACCGTCTGCT CGACGGCGGG GCAGTATTGG TCGGGCACAA TTGGGACGAT
CAGGTCGGCG TTGTGCAAAG TGCGCGCGTC GATTCCGACG GCGTCGGGCG CGCTGTTGTG
CGGTTCGGCA AGAGCGCCCG CGCGAGCGAG ATCTTTCAGG ACATCGTCGA CGGCATTCGG
CAGCACGTCT CGGTTGGCTA CCGGGTGATC ACGATCAGCG AGGAAATACG GGAAGGTCAG
CCGAACCTTA TCACGGTCAC GCGCTGGGAG CCGTTCGAGA TTTCGGTCGT ACCGGTGCCA
GCTGATCCGA CAGTCGGCAT CGGTCGCGCG CTGGAAAATC CGCCAGAGGC GGGCGGGGCG
GATCGTGGCC AAACTGGCGA AGAGAATGCG GGCGCGGTGG CCGAGCCCAA CGATACAGGA
CAAAGGGAAA CACAGATGAA AACCATCATC ACCCGCGACG CCGAGGGCAA TCTTGTCCGG
GCCAAGGTCG ACGAAAACGA TCAGATCATC GAAGTGATCG AGGTGCTCGA ACGTGCAGGC
GCAGCGGAAA CTGCCATGCT GTCGCGTCTG CAGGAGCAGG AAGCGGCCCG CGTGCGCGAA
CTGACCGAGT TGGGTCGCGA ATACGACGCG CCGGAGCTCG CAACAGAAAT GATTGCCGGG
CGTCATGGCG TGACCGACAT GCGCGAACGC CTGCTTGATC ACCTACACCA GCGCAGCAAT
GAAAGTCGCC AAATTTCTGA GCGTTCCAGC ATTGGCCTGA CCGACAGCGA AACAGAGCAG
TTTTCGTTCC TGCGCGCGAT CCGGGCGCTG GCAAATCCGA CAGACCGCAG CGCCCAGGAA
GCGGCTGCTT TCGAGTTCGA GGTCTCCGAT GCTGCCGCCG AGGCGCAGGG GCGCGATGCG
CAGGGCGTAA TGGTGCCGAT GGACGTGCTG ATGCGTGCGC CGCTGAACAC GGGTTCCGGT
GGCGCGACCG CTGCCGATAC CGGCGGCAAC ACCATCGCAA ACCCGTTGCT GACGCAGAGC
TTTATTCAGA TGCTGCGCAA CCGTACGATC CTTTTGCAGC TCGCGACTCC GCTGATGGGT
CTGGTGGGCA ACCCTGATAT CCCGACGCAG GAAGGTGGTG CGACCGGCTA CTGGATCGGT
GAGGATATCG AGGCGACAGA GGATCTGCTG TCTCTGGGTC AGCGCCAGTT TTCTCCGAAA
ACTGTTGCGG CCTATTCGGA GATCACGCGC CGCACTCTCA AGCAATCCAG TTTGGATATC
GAGGCGCTGG TGCGTAGTGA CCTTGCGCTC GCATTGGCAA CCTCGCTGGA TTTTGCGGGT
TTCTATGGCA CCGGCGCCAA CGATCAGCCG CTGGGTATCG CGAATACGAG CGGCGTGAAT
GTGGTCGACT TTGGCGGCGC AGCGTCTGGT GGCGGATCCG CCCTCCCGAC CTGGGCCGAA
GTGATCCAGA TGGAGAGCGA GATTTCTGCT GCAAATGCCG ATGTGAATAG CATGGCGTAT
GTGCAGAACG CCAAGATGCG TGGTCACTTC AAGAGCACGC AGAAATTCAG CGGCACAAAC
GGTGCGCCCA TCTGGGAGAG CGACAACACC GTGAACGGAT ATCGCGGCGA AGTTACCAAC
CAGATTAAAG ATGGTGACGT GTTCCACGGT GATTTCGCGA ACGTCCTGGT TGGCATGTGG
GGTGGTCTGG ATATTACGGT GGACCCGTAC ACCCACAGCC GCCGCGGGCG CCTGCGCATC
GTGACGATGC AGGACGCGGA TTATGTTCTG CGTCACCCGG CGGGCCTCTG CTTCGGCACT
GACGCCAGCT AA
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| Protein sequence | MTREVTAEQI NARGEGGAMR RMGEVREINV EARTVELAFS STTPVRRWFG DEVLSHDAEA
VVLDRLLDGG AVLVGHNWDD QVGVVQSARV DSDGVGRAVV RFGKSARASE IFQDIVDGIR
QHVSVGYRVI TISEEIREGQ PNLITVTRWE PFEISVVPVP ADPTVGIGRA LENPPEAGGA
DRGQTGEENA GAVAEPNDTG QRETQMKTII TRDAEGNLVR AKVDENDQII EVIEVLERAG
AAETAMLSRL QEQEAARVRE LTELGREYDA PELATEMIAG RHGVTDMRER LLDHLHQRSN
ESRQISERSS IGLTDSETEQ FSFLRAIRAL ANPTDRSAQE AAAFEFEVSD AAAEAQGRDA
QGVMVPMDVL MRAPLNTGSG GATAADTGGN TIANPLLTQS FIQMLRNRTI LLQLATPLMG
LVGNPDIPTQ EGGATGYWIG EDIEATEDLL SLGQRQFSPK TVAAYSEITR RTLKQSSLDI
EALVRSDLAL ALATSLDFAG FYGTGANDQP LGIANTSGVN VVDFGGAASG GGSALPTWAE
VIQMESEISA ANADVNSMAY VQNAKMRGHF KSTQKFSGTN GAPIWESDNT VNGYRGEVTN
QIKDGDVFHG DFANVLVGMW GGLDITVDPY THSRRGRLRI VTMQDADYVL RHPAGLCFGT
DAS
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