| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1291 |
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| Symbol | |
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| ID | 4078490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1386446 |
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| End bp | 1387345 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006599 |
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| Product | baseplate J-like protein |
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| Protein accession | YP_613286 |
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| Protein GI | 99081132 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3948] Phage-related baseplate assembly protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.482506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCG GCTTTGCATC AATCAATCTG TCTCAGTTGC CTGCGCCCGA TGTGTTGCAG
GCTATCGACT ACGAAGTCGC GCTCGCAGAA ATGCTATCTG AGCTCAGGCA GAGAGATCCG
GCTTTTGACG CTCTGGTCGA AAGTGACCCT GCCTACAAAA TCCTCGAGAT CGCGGCGTTT
TATCGAACCT TGACTATTCA GCAGGGGAAC GACGCAGCGC GAGCAGTGAT GCCTGCCTAT
GCGACGGGTT CTGATCTTGA CCATATTGCC GCCCGCTATG CTGTTGAACG ATTGGTGATC
GATCCCGGTG ATCCTGAGGC TCTCCCGCCA GTTCCCCCTG TCCTTGAGAC CGACGACGCA
TTGCGCCGCC GAATGTTCCT CGCATTTGAA GGGCTGAGCA CTGCGGGGCC GATGGGTGCC
TATGTGTTCC ATGCACTTGG CGCGGATCCG GACGTCGGGG ATGCCAGCGT GCAAAGCCCC
GCGCCGGGCG AGGTGCTGGT CACGGTTCTT TCCCGGTCGG GCGATGGTGC TGCGCCTGCA
ACTCTGCTGA CTGCTGTTGA TGCTGCCTTG AACAAGGATG ATGTGCGCCC GCTTACGGAT
CTCGTGACTG TCCAAGGGGC CGCAATCATC GGATATACCA TCGAGGCGGT TCTTACTGTC
TTACCCGGAC CCGATAGTGC GGTTGTGCGA GACGCGGCTC AACGCGCAGC ACTAGAGTAT
GCAAGCCAGC AGCACCGTAT CGGGGCAGAT ATTACCCTTT CGGGGCTTTA TGCTGCACTT
CATCAGCCAG GAGTGCAGAA CGTCGCGCTG ATCAGTCCTG CAGCAGATAT TCTGGTAGAT
GCAAGCGAGG CGGCATTCTG CTCTGCTGTT TCAGTTAGCA TTGGGGGCAC CAATGCCTGA
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| Protein sequence | MAGGFASINL SQLPAPDVLQ AIDYEVALAE MLSELRQRDP AFDALVESDP AYKILEIAAF
YRTLTIQQGN DAARAVMPAY ATGSDLDHIA ARYAVERLVI DPGDPEALPP VPPVLETDDA
LRRRMFLAFE GLSTAGPMGA YVFHALGADP DVGDASVQSP APGEVLVTVL SRSGDGAAPA
TLLTAVDAAL NKDDVRPLTD LVTVQGAAII GYTIEAVLTV LPGPDSAVVR DAAQRAALEY
ASQQHRIGAD ITLSGLYAAL HQPGVQNVAL ISPAADILVD ASEAAFCSAV SVSIGGTNA
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