| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1289 |
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| Symbol | |
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| ID | 4077449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1385181 |
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| End bp | 1385909 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006597 |
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| Product | putative variable tail fibre protein |
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| Protein accession | YP_613284 |
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| Protein GI | 99081130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5301] Phage-related tail fibre protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.314975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA TAGTTGCAAT TCACACCACC GCAGGACTGG CGCTTTTGGC GCAAGCTCAG
GGAGAGGGGG CGCTGATCAC CCTCGGCGAT ATGGCGGTGG GCGACGGTGG TGGCGCGGCA
ATTGTCCCTG ATCCGGCTAT GACTGGCCTC GCGGGAGAGG TGTTTCGGGC CGCGATCAAT
CGCGTCTATC AGCCCGATCC GATTGGCCAG CCCACCAAAT ATGCCGCCGA GCTTGTGATC
CCCGCCGCAA CGGGCGCTTT TGTTATGCGC GAGGTGGGCC TTTTTACAGA TGATGGCACA
CTTTTTGTAG TCGGCAACCT GCCGGAGACA TACAAGCCGG TGCCCGCCGA TGGCGCGTTT
TCGGACACCC TGGTCCGTAT CGAGTTCCTT GTCGCCAATG CAGGCACAAT CAACCTCACT
ATTGATCCAG CAGTGGTGAC GGCCACGACG GCATGGGTGA TCAATTATGT TGATGGCCAA
GTCTCTGCCA AATTTGCAAC CGATCCGCAG GCCATTGCGG GTGTCAGCAC AGACACAATC
ATGTCGCCAC ATGCGGTCAA ATTGGTTCTG GATCAGGCCG TAAATGATTT GGTGGCTGGC
GCGCCCGAAG CTTTGAACAC GCTGTCCGAG ATCGCCGCTG CCATCGCCAA TGATGAAAAC
TATGCGGATA CCGTGGCCAA TCTCTTGAAA CCCACGCGCG CACGGCGCGC TTACCTCGGA
GGTCGCTAA
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| Protein sequence | MTQIVAIHTT AGLALLAQAQ GEGALITLGD MAVGDGGGAA IVPDPAMTGL AGEVFRAAIN
RVYQPDPIGQ PTKYAAELVI PAATGAFVMR EVGLFTDDGT LFVVGNLPET YKPVPADGAF
SDTLVRIEFL VANAGTINLT IDPAVVTATT AWVINYVDGQ VSAKFATDPQ AIAGVSTDTI
MSPHAVKLVL DQAVNDLVAG APEALNTLSE IAAAIANDEN YADTVANLLK PTRARRAYLG
GR
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