| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1281 |
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| Symbol | |
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| ID | 4077441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1378246 |
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| End bp | 1380720 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006589 |
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| Product | hypothetical protein |
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| Protein accession | YP_613276 |
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| Protein GI | 99081122 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5412] Phage-related protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.613644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA ATCAGCGCCT TAACGCCACT GTGACCATCG GCGGTGTTGT TGAAAATTCC
TTCCGCAAGG GTATCGGTTT TGTCCGGTCG GGCTTTGACA AGGTCGGGCA AAGCATCCGC
GATGTTAAAG AACGCCAGAA AGAGCTTTCG CGCACGCGCA AAGACCTTGA GAAACAGGGC
AAATCGGTCG AGCACCTGGA CCGCGAGTAT GAAGCATTAG AGCGCACGCT CGAGGATCTG
GCGCGCAAAC AGAGGCGCTG GGAGCGCGCG ATGCGCGACA GCGCCCGGGT CGGCAAAACC
TTTGGCGATA TGACCCAACG GATCGGACGG CTCGCAAGGC AATCGGCAAT TGGAATTACA
GCGGTTGGCG CCGGGATCTT CGCGCTGACC AGTTCAACGG CTTCATACGG TGACCAGGTT
GCCAAAACGG CAGGGAAGCT CGGGATCGGG ATCGAGGCGT TACAGGAATA CCGCTATGCG
GCCGAGCGCT CTGGGGTGTC GACAGAGACG TTCGATAGCT CACTGACAGC AATGCAGAAG
CGCCTGGGCG AGGCAGCGCA AGGCACGGGT GCCGCGAAAA AAGCGCTCGA CCAGATCGGC
CTGAGTGCAA GCGACCTGAT AGCCATGGGG CCAGAGCGCG CCATGGGTGC AATCGCGGAC
AAACTGCAGG GTATCGAAGC GCCAGCCGAA CGCGCGGCGA TTGCTGCGGC ATTGTTCAGC
CGGTCGGGGA TCGGCATGGT AAACATGCTC GGAAACGGAT CGGATGCGCT GGAACAACTG
CGCGAAGACG CCCGGCGCAC CGGCTATGTC TTGAGCGAGG AAGCTGCGCG GGACGCAGAA
GCTTTTGCCG ACGCACAGCT AGATGCGCAA CTGTCGATCA AAGGCCTGAA AAACACCATC
GGGTCAGAGC TGATGCCTGT GGTCACCCGG TCGATGCAGC GGTTTAGCGA ATGGGCCGTG
ACCAATCGCG ACGACGTTGC AGCCTTTGCT GATACCGCCG CAACCAAGCT TGAGGCAGCT
TTGCCTGTGA TCGGTCAAAT CGCCGAGGGC ATGGGTGATG TGTCTAAGGC AGTCGGTGGC
GTGATCTCCA AAACGGCGGA AATGGTCGGG GGCTGGAAGA ATTTCGGAAT CGTCGTCGGC
ACGGTCTTGG CCGGTCGCAC CATCGCCAGC GTGCTCAATT TCGGCTGGGC GGTCGGTCGC
CTCGGCGTCT CTATGGCGGC GCTTGTGCCG TGGGGGGCCG CAGGAGCTGG CGCGATGAAG
TTGTTCGCTG GTGGGCTTGC CCTGGTCAAG ACGGGCGTTC TTGCTGTCGG GCGGGCTTTG
CTGATGAACC CCATTGGGCT TGCCGTGGCC GGGATCGCGG GATCTGCTTA CCTGATCTAT
GAAAACTGGG AGAAGGTCGG GCCGTGGTTC GCCGAACTAT GGGATGGCGT GAAGGGTCAT
TTCGGCGGGC TTGGTCGATT TGTCTCTGGT GTCTGGCGGG GTGACATGGA TGCCGCCGCT
GCAGGCCTGT CCGACGCTTG GGGATCAGCA AAGGCGGTCT TCTCGACAGT GTTCGACGGG
ATCACTGGAG TTTTTCGTTT TGCATGGGAG AACGGGATAA AGCCGATCAC CGACAAGCTG
GGGATTACAA GCCACATCAC AGCAGCGTGG GACATCGCCC GCACGATGAT CGGGACCGCT
ATTGGCGAAA TCGGCGTCGT GCTCGAAACT GCGTATGACG GCAGTATCGG ACCTGTGATC
GAGGCACTGG GCGCAACCGG CGGGATCTCC GCCGCGTGGG AAGAGGTCAA AACCGCTGTC
GGCGCTGTGA TCGAATGGCT GGCGCAAAAG TTCGTTTGGC TGATGGAAAA GCTGCAACCC
GTCCTCGATG GCCTGTCATG GCTCCGGGAC AAGGGTGCGG GAGCCGTCGC GGGCATCCAG
GGAATCGGCG ACAGCATCAG TAACGGTGTC AGCAATCTGT TCGGCGGTGG CGATAGCAGT
GGCGATGAAG GGCCGGCCAA TCCGCGCAGC GGTCGCGCAA AGCCCATAAG GATTTCTGGT
TCCTATTTAG GCGGCACCAT CGGGCGTGGC TTCCGCGAGG TTGGAGAACA AGGGCCTGAG
ACGATCTGGA CCTCGAAGGG CGGCTATGTG GCACACGCAA ACGCGACAGA GCGTCTGGCG
CGTCTGTCTG AGCGCGCTGG GCCTGTTCTG GATGCTTTGG GTGCTGGCCT GCAGAGGGCC
ATGGCGGGCG CGCAGCAAGC CGTCGCGCCG GTGTTGCAGC GTATCGAGGT CACAGGCGAT
CAGATGCAGG GTCGGGTAGC TTCTCCGCAG ACGCATGCTG CTCAGGCCGC GCCGGTTGTG
ATCCATGCAC AAATTCATGC TGGCAGTATG AGCCCGCAGA GTCTCATCGA CGAGCTCGAG
CGCCGCGGGC GCGAAGCGCA GGCAGGGGCG CTCTATGACC AGGCTCACAA TTATGGGCAA
TACGGGGGCG CATGA
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| Protein sequence | MAKNQRLNAT VTIGGVVENS FRKGIGFVRS GFDKVGQSIR DVKERQKELS RTRKDLEKQG
KSVEHLDREY EALERTLEDL ARKQRRWERA MRDSARVGKT FGDMTQRIGR LARQSAIGIT
AVGAGIFALT SSTASYGDQV AKTAGKLGIG IEALQEYRYA AERSGVSTET FDSSLTAMQK
RLGEAAQGTG AAKKALDQIG LSASDLIAMG PERAMGAIAD KLQGIEAPAE RAAIAAALFS
RSGIGMVNML GNGSDALEQL REDARRTGYV LSEEAARDAE AFADAQLDAQ LSIKGLKNTI
GSELMPVVTR SMQRFSEWAV TNRDDVAAFA DTAATKLEAA LPVIGQIAEG MGDVSKAVGG
VISKTAEMVG GWKNFGIVVG TVLAGRTIAS VLNFGWAVGR LGVSMAALVP WGAAGAGAMK
LFAGGLALVK TGVLAVGRAL LMNPIGLAVA GIAGSAYLIY ENWEKVGPWF AELWDGVKGH
FGGLGRFVSG VWRGDMDAAA AGLSDAWGSA KAVFSTVFDG ITGVFRFAWE NGIKPITDKL
GITSHITAAW DIARTMIGTA IGEIGVVLET AYDGSIGPVI EALGATGGIS AAWEEVKTAV
GAVIEWLAQK FVWLMEKLQP VLDGLSWLRD KGAGAVAGIQ GIGDSISNGV SNLFGGGDSS
GDEGPANPRS GRAKPIRISG SYLGGTIGRG FREVGEQGPE TIWTSKGGYV AHANATERLA
RLSERAGPVL DALGAGLQRA MAGAQQAVAP VLQRIEVTGD QMQGRVASPQ THAAQAAPVV
IHAQIHAGSM SPQSLIDELE RRGREAQAGA LYDQAHNYGQ YGGA
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