Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1280 |
Symbol | |
ID | 4077440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1377836 |
End bp | 1378246 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638006588 |
Product | phage P2 GpU |
Protein accession | YP_613275 |
Protein GI | 99081121 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.450742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGAA CGATGATGCA ACTCGGCGCC TACCAGTTCA GTATCGACAA CGCTGCCTAT CAAAACCTTG AGAGGTCGAC CGAATACCGC TGGGCTGCGC AGGAGCGTGT CGGCGCAGAT GACGCATTGC AATTCACGGG ATATGGCGAG GACACGATTT CGTTGCGCGG AGTAATTTAT CCACACTTCA AGGGCGGGCT GGCGCAACTA GACAAGATGC GCCGTCAGGC CGCCATCGGC ATTCCGTTGC CGCTCATTGC TGGTACAGGG CGCATTCTGG GCGTTTGGGT GGTCAAAAGT GTGCGAGAGG GCCAACGGAC CTTTACGCAC CATGGCGCGC CACTGTGGCA AGAATTTGGG ATCAGTATTC GGAGGTACGA CGGTGGACTC CGCAGTCTTC TACCATTCTA A
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Protein sequence | MAGTMMQLGA YQFSIDNAAY QNLERSTEYR WAAQERVGAD DALQFTGYGE DTISLRGVIY PHFKGGLAQL DKMRRQAAIG IPLPLIAGTG RILGVWVVKS VREGQRTFTH HGAPLWQEFG ISIRRYDGGL RSLLPF
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