Gene TM1040_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1280 
Symbol 
ID4077440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1377836 
End bp1378246 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID638006588 
Productphage P2 GpU 
Protein accessionYP_613275 
Protein GI99081121 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.450742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAA CGATGATGCA ACTCGGCGCC TACCAGTTCA GTATCGACAA CGCTGCCTAT 
CAAAACCTTG AGAGGTCGAC CGAATACCGC TGGGCTGCGC AGGAGCGTGT CGGCGCAGAT
GACGCATTGC AATTCACGGG ATATGGCGAG GACACGATTT CGTTGCGCGG AGTAATTTAT
CCACACTTCA AGGGCGGGCT GGCGCAACTA GACAAGATGC GCCGTCAGGC CGCCATCGGC
ATTCCGTTGC CGCTCATTGC TGGTACAGGG CGCATTCTGG GCGTTTGGGT GGTCAAAAGT
GTGCGAGAGG GCCAACGGAC CTTTACGCAC CATGGCGCGC CACTGTGGCA AGAATTTGGG
ATCAGTATTC GGAGGTACGA CGGTGGACTC CGCAGTCTTC TACCATTCTA A
 
Protein sequence
MAGTMMQLGA YQFSIDNAAY QNLERSTEYR WAAQERVGAD DALQFTGYGE DTISLRGVIY 
PHFKGGLAQL DKMRRQAAIG IPLPLIAGTG RILGVWVVKS VREGQRTFTH HGAPLWQEFG
ISIRRYDGGL RSLLPF