| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1269 |
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| Symbol | |
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| ID | 4077663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1366861 |
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| End bp | 1368231 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006577 |
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| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
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| Protein accession | YP_613264 |
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| Protein GI | 99081110 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT GGCAAAAAAC GAACTGGCGC AGCAAGCCGC GCGTACAGAT GCCTGACTAT
ACCGATCAGG CCGCGCTGCA GGCTGTTGAG GCGCAGCTGG CCAAGTATCC GCCCCTGGTT
TTTGCCGGTG AATCCCGTCG CCTGAAGGCG CAACTGGGTG CTGCCGGGCG CGGCGAGGCC
TTCTTGCTGC AAGGCGGCGA CTGCGCCGAG AGCTTTGAGC AGTTCAGCGC AGACGGCATC
CGCGACACCT TCAAGGTGAT GTTGCAGATG GCCATGGTGC TGACCTATGG CGCCAAGGTG
CCGGTGGTCA AAGTGGGCCG CATGGCCGGT CAATTTGCCA AACCCCGCTC GGCGCCGACC
GAGACCGTTG ATGGGGTCGA ACTGCCGAGC TATCGCGGTG ACATCATCAA CGAGCTGGCC
TTTACACCCG AAGCGCGTAT TCCCGATCCG CGCAAAATGC TGCAGGCCTA TACCCAGGCG
GCGGCGACGT TGAACCTGAT CCGCGCCTTC TCGACCGGCG GCTATGCGGA TGTGCATCAG
GTCCACGCCT GGACCTTGGG GTTCACCGAA GGCGACAAGG CCGAAGCCTA TCGGGATATG
GCCAATCGGA TCACCGATAC GCTCGACTTC ATGAAAGCCG CCGGTGTGAC CGCCGACAAT
GCTCATACGC TGCAGACGGT GGAATTCTAC ACCAGCCATG AAGGTCTGTT GCTGGAGTAT
GAAGAGGCGC TGACACGTCT CGACTCGACT TCCGGCAAAT GGCTTGCGGG TTCGGGTCAC
ATGATCTGGA TCGGGGACCG CACACGCCAG CCCGATGGCG CGCATGTGGA ATTCTGCAGC
GGGGTCTTGA ACCCGATCGG TCTCAAATGT GGTCCGACCA CCACAGCTGA CGACCTCAAG
GTCCTGATGC AAAAGCTCAA TCCTGAAAAC GAAGAAGGCA AGCTGACGCT GATCGCCCGC
TTTGGCGCCG GCAAAGTTGC AGACCATCTG CCACGCCTCA TTCAGGCCGT GAAGGACGAA
GGGGCCAATG TCACCTGGGT CTGTGATCCG ATGCATGGCA ACACCATCAA ATCCGCCAGC
GGCTACAAGA CCCGTCCGTT TGACTCGGTG CTGCGCGAAG TGCGTGATTT CTTTGGTGTG
CATCAGGCCG AAGGAACGAT CCCCGGTGGC GTTCACTTTG AGATGACGGG CCAGGATGTC
ACCGAATGCA CCGGCGGCGT GCGCGAAGTG ACCGACGAGG ACCTGAGCGA TCGCTACCAC
ACCGCCTGCG ATCCCCGTCT CAACGCGGAT CAATCGCTGG AACTGGCGTT TCTTGTCGCA
GAAGAACTGT CGCGCCTGCG CACACCGGAC GACACGCGCG CCGCGATCTG A
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| Protein sequence | MSDWQKTNWR SKPRVQMPDY TDQAALQAVE AQLAKYPPLV FAGESRRLKA QLGAAGRGEA
FLLQGGDCAE SFEQFSADGI RDTFKVMLQM AMVLTYGAKV PVVKVGRMAG QFAKPRSAPT
ETVDGVELPS YRGDIINELA FTPEARIPDP RKMLQAYTQA AATLNLIRAF STGGYADVHQ
VHAWTLGFTE GDKAEAYRDM ANRITDTLDF MKAAGVTADN AHTLQTVEFY TSHEGLLLEY
EEALTRLDST SGKWLAGSGH MIWIGDRTRQ PDGAHVEFCS GVLNPIGLKC GPTTTADDLK
VLMQKLNPEN EEGKLTLIAR FGAGKVADHL PRLIQAVKDE GANVTWVCDP MHGNTIKSAS
GYKTRPFDSV LREVRDFFGV HQAEGTIPGG VHFEMTGQDV TECTGGVREV TDEDLSDRYH
TACDPRLNAD QSLELAFLVA EELSRLRTPD DTRAAI
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