| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1264 |
|---|
| Symbol | |
|---|
| ID | 4077658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 1362175 |
|---|
| End bp | 1363356 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638006572 |
|---|
| Product | cystathionine gamma-synthase |
|---|
| Protein accession | YP_613259 |
|---|
| Protein GI | 99081105 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAATT CTCGCCCCTC CGTAATGCGT CCCCATGGCC TGCCGGACAG CGCCAGCCAC
CCGGTTGTCA CTCCGCTGAG CCCCTCGGTC GTTTACGCGT CTGAAACCCC GGATGCGCTG
GATGATCAAT ATGAGGGCCG CGTCCATGGC TATACCTACT CGCGCGAGGG ACACCCAAAC
GCGGATGTGA TCGCGCGGCG GCTCGACGAC ATGGAAGGGG CGTCGGGCGG CGTTGTCTGT
GGCTCCGGCA TGGCGGCGGT CTCAGCGGTG CTGCTGGGGC TGTTGCAAAC CGGTGATCAT
GTCATCGGCG GCGATCAGCT CTACGGGCGC TCGCTGCGCC TGATGAAAGA AGACCTGCCA
CGGCTGGGGA TCGCAACAAC CCTCGCCAAC CCCGGTGACG TTGCGGCGAT CCGCGCGGCA
ATCCGCCCCG AGACCAAGCT CATTCTGGTC GAAGCCGTTT CCAATCCGAC ACTGGCGGTG
GCCGACATCG ATGGCCTTGC AGCGCTCTGC CGCGAGCACG GTATTTTGCT GGCCGTCGAC
AATACCTTCA CCACGCCGCG CGCGTTCAAA CCCTTTGAGC ATGGTGCGGA CATCGTGATC
CATTCGGTGA CAAAGCTGCT CGCGGGCCAC TCTGATGTGA TGCTTGGGTA TGTGGTCGCC
AAAGATCCGG CGCTCAATGA CCGGATGCGC GTGTTCTCCG TGACCACCGG CATGACGCCA
AGCCCCTTTG ACTGCTGGTT GGCGGAGCGG GGGCTGTTGT CCTTTGATCT GCGCTTTGAC
CGCGCCGAGG CGACGGCTGC ACGGCTTGCG GATCACATCG CAACCCTGCC GGGCATCAAA
CGCGTGATCT ACCCCACGCG CAAGGATCAT CCCGATCATG CGCGCGCAGA GGCGCTCCTG
AAGGGGCGGG GCTGCAATAT GGTGAGCTTT GAGCTTGATG GCGGACGAGA AGCGGCCAAT
GCCTTTACCC GCGCAGCAGA AGGCCTGTCC TTTGCGCCGA CCTTGGGCGA TGTGGGCACG
ACGCTCTCGC ATCCGGCATC CTCATCGCAT CGGGCGCTTA CGGCTGAAAA CCGGGCAGAA
CTCGGCCTGC ACGAGGGTTT CTTTCGCGTG TCCGTAGGGC TGGAGGATCC AGAGGCGCTC
TGCGCGATCT TCGAGAACGC CATCACCTCT GCCATGTCCT AG
|
|---|
| Protein sequence | MKNSRPSVMR PHGLPDSASH PVVTPLSPSV VYASETPDAL DDQYEGRVHG YTYSREGHPN
ADVIARRLDD MEGASGGVVC GSGMAAVSAV LLGLLQTGDH VIGGDQLYGR SLRLMKEDLP
RLGIATTLAN PGDVAAIRAA IRPETKLILV EAVSNPTLAV ADIDGLAALC REHGILLAVD
NTFTTPRAFK PFEHGADIVI HSVTKLLAGH SDVMLGYVVA KDPALNDRMR VFSVTTGMTP
SPFDCWLAER GLLSFDLRFD RAEATAARLA DHIATLPGIK RVIYPTRKDH PDHARAEALL
KGRGCNMVSF ELDGGREAAN AFTRAAEGLS FAPTLGDVGT TLSHPASSSH RALTAENRAE
LGLHEGFFRV SVGLEDPEAL CAIFENAITS AMS
|
|---|
| |