Gene TM1040_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1260 
Symbol 
ID4077654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1356784 
End bp1358151 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content59% 
IMG OID638006568 
Productphosphate ABC transporter permease 
Protein accessionYP_613255 
Protein GI99081101 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TTAGCCAAAA TCCCTCCTCC GGAGACGCAC CCATGTCGCG CAAACCTGGC 
ACCTCACTGC TGGAACTGTC GGATCGCACC AAACGCCGCA ACGCCGCCGA GACCCGGTTC
AAGGCCTATG GCATTGCCGC TATCGCGGTC GGCCTGTTGA TGCTTGTTGT TCTGGTGACA
ACCATCGTCA GCAAGGGAAC AGGCGCGTTT CAGCAGACAT TCATCACGCT CCCGGTCGAG
CTCCTGGAAA GCAAGCTCGA CAAGAACGGC AACCGCGATA TTGAAGACAT CAAGAAGGTC
ACGACGTTTG GATATGCGCC GATCATTCGC AACGCCGTCG AGGCGAAAGT GACCGATCTT
GGCGTTGAAA CCTCGCTCAA GGCCAAGGAC ATGGCGGGGC TTCTGTCCAA GAACGCCGCC
GCAACCCTGC GCGAATTCGT GATCGCCAAT CCGGATCAGA TCGGCACCAC TGTGGAGTTC
CGCTTCCTCG CACAGAGCCG TGTCGACGGG TATCTGAAGG GGCGCGTGAG CCGAGACAGC
ATCGAGAATG ACAAGAATAT CTCGGTTGAA CAGCTCGATC TCGTTGACGC GCTGGTGGCG
GCCAATGTGA TCGAAAAAAC CTTCAACCTC GACTTCATTC TCGGCTCGGA TGCATCGGAC
GCACGCCCCG AAGCCGCAGG CATGGGGGTC TCCATGTTGG GGTCGCTCTT CATGATGTTC
GTGGTGCTGG CGCTTGCACT GCCGATCGGA GTTGCGGCTT CGATCTATCT TGAGGAGTTT
GCGCCGCAGA ACTGGATTAC CGACATCATC GAGGTGAACA TCTCCAACCT CGCGGCGGTA
CCCTCGATTG TCTTTGGTAT TCTGGGGCTT GCGGTCTTTA TCAACTACAT GCACCTGCCG
ACCTCGGCGC CGCTTGTGGG CGGTCTGGTG CTCACGCTGA TGACACTGCC GACCATCATC
ATCTCGACCC GCGCGTCGCT TAAGGCCGTA CCGCCTTCGA TCCGCGATGC CGCATTGGGC
GTGGGCGCCT CCAAGATGCA GGCCGTGTTT CACCATGTTC TGCCGCTCGC CGCACCGGGG
ATCCTCACCG GGACCATCAT CGGTCTGGCA CAAGCACTGG GTGAAACCGC GCCGCTTCTG
CTGATCGGCA TGGTGGGCTT TATCGCCTCC AACGCCCCCG ACAGCATTGC CTCCGGTCTC
TTGTCGCCGA ACTCCGCCAT GCCCGCACAG ATCTATGAGT GGGCCAAACG CGCCGATCCA
GCGTTTTACG AACGCGCCTG GGGCGGTATC ATCATCCTGC TGGTCTTCTT GATCACCATG
AACACATTGG CCGTTATCTT GCGCCGCCGA TTTGAACGCC GCTGGTAA
 
Protein sequence
MTDLSQNPSS GDAPMSRKPG TSLLELSDRT KRRNAAETRF KAYGIAAIAV GLLMLVVLVT 
TIVSKGTGAF QQTFITLPVE LLESKLDKNG NRDIEDIKKV TTFGYAPIIR NAVEAKVTDL
GVETSLKAKD MAGLLSKNAA ATLREFVIAN PDQIGTTVEF RFLAQSRVDG YLKGRVSRDS
IENDKNISVE QLDLVDALVA ANVIEKTFNL DFILGSDASD ARPEAAGMGV SMLGSLFMMF
VVLALALPIG VAASIYLEEF APQNWITDII EVNISNLAAV PSIVFGILGL AVFINYMHLP
TSAPLVGGLV LTLMTLPTII ISTRASLKAV PPSIRDAALG VGASKMQAVF HHVLPLAAPG
ILTGTIIGLA QALGETAPLL LIGMVGFIAS NAPDSIASGL LSPNSAMPAQ IYEWAKRADP
AFYERAWGGI IILLVFLITM NTLAVILRRR FERRW