Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1260 |
Symbol | |
ID | 4077654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1356784 |
End bp | 1358151 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638006568 |
Product | phosphate ABC transporter permease |
Protein accession | YP_613255 |
Protein GI | 99081101 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0581] ABC-type phosphate transport system, permease component |
TIGRFAM ID | [TIGR00974] phosphate ABC transporter, permease protein PstA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATC TTAGCCAAAA TCCCTCCTCC GGAGACGCAC CCATGTCGCG CAAACCTGGC ACCTCACTGC TGGAACTGTC GGATCGCACC AAACGCCGCA ACGCCGCCGA GACCCGGTTC AAGGCCTATG GCATTGCCGC TATCGCGGTC GGCCTGTTGA TGCTTGTTGT TCTGGTGACA ACCATCGTCA GCAAGGGAAC AGGCGCGTTT CAGCAGACAT TCATCACGCT CCCGGTCGAG CTCCTGGAAA GCAAGCTCGA CAAGAACGGC AACCGCGATA TTGAAGACAT CAAGAAGGTC ACGACGTTTG GATATGCGCC GATCATTCGC AACGCCGTCG AGGCGAAAGT GACCGATCTT GGCGTTGAAA CCTCGCTCAA GGCCAAGGAC ATGGCGGGGC TTCTGTCCAA GAACGCCGCC GCAACCCTGC GCGAATTCGT GATCGCCAAT CCGGATCAGA TCGGCACCAC TGTGGAGTTC CGCTTCCTCG CACAGAGCCG TGTCGACGGG TATCTGAAGG GGCGCGTGAG CCGAGACAGC ATCGAGAATG ACAAGAATAT CTCGGTTGAA CAGCTCGATC TCGTTGACGC GCTGGTGGCG GCCAATGTGA TCGAAAAAAC CTTCAACCTC GACTTCATTC TCGGCTCGGA TGCATCGGAC GCACGCCCCG AAGCCGCAGG CATGGGGGTC TCCATGTTGG GGTCGCTCTT CATGATGTTC GTGGTGCTGG CGCTTGCACT GCCGATCGGA GTTGCGGCTT CGATCTATCT TGAGGAGTTT GCGCCGCAGA ACTGGATTAC CGACATCATC GAGGTGAACA TCTCCAACCT CGCGGCGGTA CCCTCGATTG TCTTTGGTAT TCTGGGGCTT GCGGTCTTTA TCAACTACAT GCACCTGCCG ACCTCGGCGC CGCTTGTGGG CGGTCTGGTG CTCACGCTGA TGACACTGCC GACCATCATC ATCTCGACCC GCGCGTCGCT TAAGGCCGTA CCGCCTTCGA TCCGCGATGC CGCATTGGGC GTGGGCGCCT CCAAGATGCA GGCCGTGTTT CACCATGTTC TGCCGCTCGC CGCACCGGGG ATCCTCACCG GGACCATCAT CGGTCTGGCA CAAGCACTGG GTGAAACCGC GCCGCTTCTG CTGATCGGCA TGGTGGGCTT TATCGCCTCC AACGCCCCCG ACAGCATTGC CTCCGGTCTC TTGTCGCCGA ACTCCGCCAT GCCCGCACAG ATCTATGAGT GGGCCAAACG CGCCGATCCA GCGTTTTACG AACGCGCCTG GGGCGGTATC ATCATCCTGC TGGTCTTCTT GATCACCATG AACACATTGG CCGTTATCTT GCGCCGCCGA TTTGAACGCC GCTGGTAA
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Protein sequence | MTDLSQNPSS GDAPMSRKPG TSLLELSDRT KRRNAAETRF KAYGIAAIAV GLLMLVVLVT TIVSKGTGAF QQTFITLPVE LLESKLDKNG NRDIEDIKKV TTFGYAPIIR NAVEAKVTDL GVETSLKAKD MAGLLSKNAA ATLREFVIAN PDQIGTTVEF RFLAQSRVDG YLKGRVSRDS IENDKNISVE QLDLVDALVA ANVIEKTFNL DFILGSDASD ARPEAAGMGV SMLGSLFMMF VVLALALPIG VAASIYLEEF APQNWITDII EVNISNLAAV PSIVFGILGL AVFINYMHLP TSAPLVGGLV LTLMTLPTII ISTRASLKAV PPSIRDAALG VGASKMQAVF HHVLPLAAPG ILTGTIIGLA QALGETAPLL LIGMVGFIAS NAPDSIASGL LSPNSAMPAQ IYEWAKRADP AFYERAWGGI IILLVFLITM NTLAVILRRR FERRW
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