Gene TM1040_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1243 
Symbol 
ID4076358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1338500 
End bp1338814 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID638006551 
Producthypothetical protein 
Protein accessionYP_613238 
Protein GI99081084 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA CGACAACAAA TAGCGTCGAA GGCTACCAGA TCTCCGAGTA CAAAGGCATC 
GTCGTGGGCG AGGCAATCAT GGGTGCCAAT GTTGTGCGCG ATGTATTTGC CCAGATCACC
GACATTGTTG GCGGTAGATC AGGCGCTTAT GAGAGCAAGC TGCAGGACGC GCGCGAGACG
GCTTTGAGCG AACTCGAAGA CCGGGCGCGT GCGCTTGGCG CGAATGCGGT TGTGGGGGTC
GACCTCGATT ATGAAGTTGT CGGGCAATCG ATGCTCATGG TCTCTGCCAG CGGCACCGCT
GTCGTGATCG GCTAA
 
Protein sequence
MIVTTTNSVE GYQISEYKGI VVGEAIMGAN VVRDVFAQIT DIVGGRSGAY ESKLQDARET 
ALSELEDRAR ALGANAVVGV DLDYEVVGQS MLMVSASGTA VVIG