| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1240 |
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| Symbol | |
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| ID | 4076355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1335357 |
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| End bp | 1335815 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006548 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_613235 |
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| Protein GI | 99081081 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTT CGACAAAAGG ACGGTACGCA ATGGTGGCCT TGGCTGACAT CGCGTTGCAG
CCATCAGAGG GACTGGTCGT CCTGGCCGAT ATCTCCAAGC GTCAGCAGAT CTCTTTGCCG
TATCTCGAGC AGCTCTTCGT GAAACTACGT CGTGGCGGGC TTGTGGCCTC CGTGCGTGGG
CCCGGGGGTG GGTATCGTCT GGCGCGGCCC GCATCCGAAA TTCGGGTCGT TGAGATCCTC
GCCGCCGTTG ATGAGACCGT AGACGCCATG CACAAGGGGG CAGGGGCGTC GGGTGGATCA
AGTGGGAGCA GGGCGCAATC ACTGACCAAC CGTCTGTGGG AGGGGCTGAG TGCGCATGTC
TACGTCTTTC TTCATCAAAC ACGCCTTTCG GATGTGATCG AGAACGACCT CGCGCCCTGT
CCAGCAGTGC CCAATCTCTT CTCCGTGGTC GATGAATAG
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| Protein sequence | MKLSTKGRYA MVALADIALQ PSEGLVVLAD ISKRQQISLP YLEQLFVKLR RGGLVASVRG
PGGGYRLARP ASEIRVVEIL AAVDETVDAM HKGAGASGGS SGSRAQSLTN RLWEGLSAHV
YVFLHQTRLS DVIENDLAPC PAVPNLFSVV DE
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