| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1237 |
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| Symbol | |
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| ID | 4076352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1333106 |
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| End bp | 1334272 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006545 |
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| Product | HD domain-containing protein |
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| Protein accession | YP_613232 |
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| Protein GI | 99081078 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1896] Predicted hydrolases of HD superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAG ATCTTGAGCA GCAATTCGAA TTCCTCACTG AAATCGAAAG GCTGCGCGAG
GTGGAACGGC AGAACCTTCT GCTGGACGGC AGCCGGGTAG AAAATTCGGC CGAGCACAGC
TGGCATCTGG CGCTCTATGC GCTGGTGTTT GCCCCCTATG CGCCCTCCGA CGTGTCCATA
ACCCGTGTCA TCGAGATGCT CTTGCTGCAT GACATCGTGG AGATCGACGT TGGCGATCAT
CCGATTGATG AGCCAACAGA CTGGGAGGCG GTGGCACAAG CCGAAGACCG CGCGCAGCGA
CGGATATTCG GACTGCTTCC AGAAGCGCAG GGCCACCGGC TGCAGGCGCT CTGGCAGGAA
TTTGAAGCGG CGCATACAGC AGATGCGCGC TTTGCAAAAT CGCTGGACTA CTGCCAGCCG
ATCTTCCAGA CGCTTTGCGC TGTTTCGCCT CCCGCCGATC ACCTTCGGGT GGTACGCGAA
AACCTGACCA CCGGTCGCGC CACCTCTCTT CGAGAGCGGT TTCCCGAGGC TTATGCAGCA
GCATGCAGCC TCATTGACGG TCAGACCGTC AGCGATCCGG ACTTTGCAGC ACGGCTCGCG
TTTCTGTCCG AAGCTGACCG GTTGAAGTCG GTTCTACGCG CCTCGCGGAT TGCCTCCGGC
ACCCGATATG AAAACTCGGC AGAACACAGC TGGCACATCA TGCTCTATGG CTGGATCCTC
GCTCCGCATA GCCTGTCGGA AGTCGACGTC TCGCGCGTTC TCAAGATGCT GCTACTGCAC
GATCTGGTCG AGATTGACGC CGGCGATGTG CCCATTCACT CCAATCTGGA CGCCGCCGCG
CTGCGCCAGA TCGAAGAGAC TGAGAAAGCC GCCGCAGAGC GGATCTTTGG GCTGTTGCCG
GACGCGCAGG CCAAGGACTG CCTCATGATC TGGCAGGAAT TCGAAGCCGC CCAGAGCGCG
GATGCGGTCT TTGCCAAATC CATCGACCGC GTGCAGCCGG TCTTGTTGAA TATTGCCACC
GGCGGTGGCA GCTGGGTGGC CTATGATGTC ACCCTACCGC AGCTGGAAAC CCGCGTGGGC
GTGAAAATTG CGCGGGGCGC ACCGAAGGTC TGGGACCATG TGCGTGCGCT TCTGTTGCCC
TGGTTTACGG CACAAGGCCG CCTCTGA
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| Protein sequence | MTTDLEQQFE FLTEIERLRE VERQNLLLDG SRVENSAEHS WHLALYALVF APYAPSDVSI
TRVIEMLLLH DIVEIDVGDH PIDEPTDWEA VAQAEDRAQR RIFGLLPEAQ GHRLQALWQE
FEAAHTADAR FAKSLDYCQP IFQTLCAVSP PADHLRVVRE NLTTGRATSL RERFPEAYAA
ACSLIDGQTV SDPDFAARLA FLSEADRLKS VLRASRIASG TRYENSAEHS WHIMLYGWIL
APHSLSEVDV SRVLKMLLLH DLVEIDAGDV PIHSNLDAAA LRQIEETEKA AAERIFGLLP
DAQAKDCLMI WQEFEAAQSA DAVFAKSIDR VQPVLLNIAT GGGSWVAYDV TLPQLETRVG
VKIARGAPKV WDHVRALLLP WFTAQGRL
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