| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1235 |
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| Symbol | |
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| ID | 4076350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1330689 |
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| End bp | 1332509 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006543 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_613230 |
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| Protein GI | 99081076 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.684296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC GCAATATTGC GATCATCGCG CACGTTGACC ACGGCAAAAC CACTCTGGTT
GACGAGCTTC TGAAACAATC CGGCGCCTTT CGCGAAAACC AGGCCGTGGC TGAACGCGCC
ATGGACTCCA ACGATCTGGA ACGCGAGCGC GGCATCACCA TCCTGGCCAA AGCCACCTCG
GTAGAATGGA ACGGCACGCG GATCAACATC GTCGACACCC CCGGCCACGC CGACTTTGGT
GGCGAAGTAG AACGCATCCT CTCCATGGTG GACGGTGTTG TTCTGCTTGT GGACGCCGCC
GAAGGCCCGA TGCCGCAGAC CAAATTCGTG ACCTCGAAAG CGCTTGCGCT GGGCCTTCGC
CCGATCGTTG TGCTGAACAA GGTCGACAAG CCCGATGCCG AGCCCGACCG CGCGCTCGAC
GAGTGTTTTG ACTTGTTTGC AAACCTCGGT GCGGACGACG ATCAGCTCGA CTTCCCCTCC
ATGTATGCGT CCGGCCGCTC CGGCTGGGCC GATATGGAAC TGGATGGTCC GCGCAAGGAT
CTCTCGGCGC TGTTTGACCT CATCGTAAAG CACGTCCCCG CGCCCAAGCA GATCGCGCAG
AAGGATGAAC CCTTCCGCAT GCTCGCAACC ACGCTCGGCT CCGACCCTTT CATGGGCCGC
ATCCTGACCG GACGTGTGGA AAGCGGCACG CTCAAGGTGG GCGACAGCCT AAAGGCGCTG
ACTCGTGAGG GCGAGTTGAT CGAGAACTTC CGTGCCACCA AGATCCTCGC GTTCCGTGGT
CTGGCCCAGC AGCCGATCGA TCTCGCCGAA GCTGGCGACA TCGTGACCAT CGCCGGCATG
GCAAAGGCCA CCGTTGCGGA TTCGCTTGTG GACACCTCCG TTACCGAAGC CCTGCCCGCC
CAGCCGATCG ATCCGCCGAC GATCACCGTG ACCTTTGGCA TCAACGACAG CCCTCTGGCG
GGTCGTGATG GCAAGAAAGT CCAGTCGCGC GTGATCCGGG ATCGCCTCCT GAAAGAGGCC
GAGCTCAATG TCGCCATCGA GGTCACCGAC ACCCCCGGCG GTGAGGCCTT TGAGGTCGCA
GGTCGTGGCG AATTGCAGAT GGGCGTTCTC ATCGAGAACA TGCGCCGCGA GGGCTTTGAA
CTCTCTATTT CGCGCCCGCA GGTTCTGTTC AAAGAAGAGA ACGGTCAGCG CATGGAGCCG
GTCGAGGAAG CCACCATTGA CGTGGATGAC GAATACTCCG GCGTGGTGAT CGAAAAGCTC
ACCGGCAACC GCAAGGGCGA GCTCGTAGAG ATGAAGCCCG CCGGTGCAGG CAAGACCCGC
ATCATCGCCC ATGTCCCGTC ACGTGGCCTC ATCGGGTATC ACGGTGAATT CCTCACCGAC
ACCCGCGGCA CCGGTGTTCT GAACCGCGTG TTCCACGGCT GGACCCCGCA CAAGGGCGCC
ATCCCGGGCC GTCGCGCGGG CGTGCTGATC TCAATGGAGA ACGGTCAATC CGTGGCCTAT
GCGCTGTGGA ACCTCGAAGA GCGTGGCAAG ATGTTTATCG GCGCACAAGC CGACGTCTAC
ACCGGCATGA TCATTGGCGA GCACAGCCGC GACAATGATC TCGAGGTGAA CCCGCTCAAG
GGAAAGAAGC TCACCAACGT GCGGGCCTCT GGCTCTGATG ACGCCGTGCG CCTGACCACG
CCCGTCACGC TCTCGCTGGA AGAGGCGATT GCCTATATCA ACGACGACGA GCTGGTCGAA
GTGACGCCGA ACTCCGTGCG TCTGCGCAAG CGCTACCTCG ATCCGCATGA GCGCAAGCGG
ATGGCCAAGG CGAACAGCTG A
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| Protein sequence | MDLRNIAIIA HVDHGKTTLV DELLKQSGAF RENQAVAERA MDSNDLERER GITILAKATS
VEWNGTRINI VDTPGHADFG GEVERILSMV DGVVLLVDAA EGPMPQTKFV TSKALALGLR
PIVVLNKVDK PDAEPDRALD ECFDLFANLG ADDDQLDFPS MYASGRSGWA DMELDGPRKD
LSALFDLIVK HVPAPKQIAQ KDEPFRMLAT TLGSDPFMGR ILTGRVESGT LKVGDSLKAL
TREGELIENF RATKILAFRG LAQQPIDLAE AGDIVTIAGM AKATVADSLV DTSVTEALPA
QPIDPPTITV TFGINDSPLA GRDGKKVQSR VIRDRLLKEA ELNVAIEVTD TPGGEAFEVA
GRGELQMGVL IENMRREGFE LSISRPQVLF KEENGQRMEP VEEATIDVDD EYSGVVIEKL
TGNRKGELVE MKPAGAGKTR IIAHVPSRGL IGYHGEFLTD TRGTGVLNRV FHGWTPHKGA
IPGRRAGVLI SMENGQSVAY ALWNLEERGK MFIGAQADVY TGMIIGEHSR DNDLEVNPLK
GKKLTNVRAS GSDDAVRLTT PVTLSLEEAI AYINDDELVE VTPNSVRLRK RYLDPHERKR
MAKANS
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