| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1226 |
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| Symbol | |
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| ID | 4075934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1318425 |
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| End bp | 1320509 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006534 |
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| Product | ferredoxin |
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| Protein accession | YP_613221 |
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| Protein GI | 99081067 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3894] Uncharacterized metal-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.277788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGCA TCAACTGCGC AGAATTAAAG GCTAAAGACA TGTCGAACGA TCCCCTCGTC
GTGTTCACCC CCTCCGGCAA ACGCGGACGT TTTCCAGTTG GCACTCCGGT GCTGACGGCG
GCGCGCCAGC TGGGGGTCGA TCTTGATTCC GTTTGTGGTG GGCGGGGCAT CTGCTCCAAA
TGCCAGATCA CGCCGTCTTA TGGTGAATTC TCGAAACACG GTGTCACCGT GGCCGATGAC
GCCCTGTCGG AATGGAACAA GGTCGAGCAG CGCTATAAGG ACAAGCGCGG TCTGATCGAC
GGGCGCCGTC TGGGCTGTCA GGCGAAGATC GAAAAAGACG TGGTGATCGA CGTCCCGGCC
GAGAGCCAGG TCCACAAGCA AGTGGTTCGC AAGCGGGCCG AGGCGCGCGA CATCGTCATG
AACCCCTCAA TCCGCCTGTA TTATGTCGAG GTAGAAGAAC CGGATATGCA CAAGCCCACC
GGCGACTTGG AGCGTCTGTG TGAGGGGCTT GAGAAGCAGT GGAATATCAA GGGCGTAAAA
GCCGATTTTG AGGTTCTTAG AGAGCTGCAG CCGACCCTGC GCAAAGGCGG CTGGACGGTG
ACGGTCGCGG TGCAACTGGG GACTGAGACC GCGCCTGCGC GCATCATGCA GATCTGGCCG
GGCTACTATG AAGGTACGGT TTACGGGCTG GCGGTGGACC TTGGCTCTAC CACCATTGCG
GCGCATCTGT GCGATCTCAA AACCGGCGAG GTTCTGGCGT CCTCGGGGAT CATGAACCCG
CAGATCCGCT TTGGCGAAGA TCTGATGAGC CGGGTGTCTT ATGCTATGAT GAACAAGGGC
GGTGATCTGG AGATGACCCG CGCCGTGCGT GAAGGGATGA ACGCGCTCTT TTCGCAGATT
TCAGAAGAGG CGCAGATTGA TCAGGGGCTG ATCATGGACG CGGTCTTTGT CTGCAACCCC
GTCATGCATC ACCTGTTTCT CGGAATCGAT CCCTTTGAAC TTGGACAGGC ACCCTTTGCG
CTGGCCACAT CGGACGCCTT GGCGCTGCAA GCGCGCGATC TGGATCTGAA ACTTCACCGT
GCGGCGCGGA TCTATCTGTT GCCCTGTATC GCGGGACACG TCGGCGCGGA TGCAGCGGCC
GTCGCCCTCT CTGAGGCACC GGATAAATCC GATGACCTCG TGCTCGTTGT CGATGTGGGA
ACAAATGCCG AGATCCTATT GGGAAACAAG GATAAAGTGC TGGCGTGCTC TTCGCCAACG
GGCCCTGCCT TTGAGGGGGC GCAGATTTCC TCCGGCCAGC GTGCAGCCCC CGGTGCCATC
GAACGTGTCG AGATCGATCC CGTCACCAAA GAGCCTCGGT TCCGTGTCAT CGGGTCCGAG
ATCTGGTCGG ATCAGGACGG GTTTGAGCAG AGCATCGCAA CCACCGGGAT CACCGGCATC
TGCGGCTCTG GCATCATCGA GGCCATCGCA GAGATGCGGC TGGCTGGTGT ATTGGATGCC
TCGGGTCTGA TCGGATCCGC CGAGCAGACC GGAAGCGCGC GGTGTGTCCC CGAAGGTCGC
ACCAATGCCT ATCTCCTGTG GGACGCAACC GCAGAGGGGG GGCCACGCAT TACAGTCACC
AATCCCGACA TCCGGGCGAT CCAGATGGCC AAGGCGGCGC TCTATTCCGG GGCGCGGCTG
CTGATGGACA AGATCGGCGT GGATCAGGTG GACCGCGTGG TTCTCGCGGG GGCCTTTGGC
GCGCATATCT CGGCCAAACA TGCGATGGTG CTGGGCATGA TCCCCGATTG CCCCCTCGAC
AAGGTGACAA GCGCAGGCAA CGCGGCGGGA ACGGGCGCGC GGATTGCGCT CCTCAACACT
GACGCGCGTC AAGAGATCGA AGATACCGTG CGCAAGATCG AGAAAGTCGA AACCGCTGTC
GAGCCACGTT TCCAGGAGCA TTTTGTCAAT GCTTCTGCAA TTCCGAACTC CGCCGAGCCT
TTCCCGATCC TGCAAAGCGT GGTGAGCCTG CCGGAGGTGA GCTTCAACTC CGCCGGGGCA
GACGCCGCCC GCAGCGGTGG TCGGCGCAGG CGCCGCGGCG GCTGA
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| Protein sequence | MLRINCAELK AKDMSNDPLV VFTPSGKRGR FPVGTPVLTA ARQLGVDLDS VCGGRGICSK
CQITPSYGEF SKHGVTVADD ALSEWNKVEQ RYKDKRGLID GRRLGCQAKI EKDVVIDVPA
ESQVHKQVVR KRAEARDIVM NPSIRLYYVE VEEPDMHKPT GDLERLCEGL EKQWNIKGVK
ADFEVLRELQ PTLRKGGWTV TVAVQLGTET APARIMQIWP GYYEGTVYGL AVDLGSTTIA
AHLCDLKTGE VLASSGIMNP QIRFGEDLMS RVSYAMMNKG GDLEMTRAVR EGMNALFSQI
SEEAQIDQGL IMDAVFVCNP VMHHLFLGID PFELGQAPFA LATSDALALQ ARDLDLKLHR
AARIYLLPCI AGHVGADAAA VALSEAPDKS DDLVLVVDVG TNAEILLGNK DKVLACSSPT
GPAFEGAQIS SGQRAAPGAI ERVEIDPVTK EPRFRVIGSE IWSDQDGFEQ SIATTGITGI
CGSGIIEAIA EMRLAGVLDA SGLIGSAEQT GSARCVPEGR TNAYLLWDAT AEGGPRITVT
NPDIRAIQMA KAALYSGARL LMDKIGVDQV DRVVLAGAFG AHISAKHAMV LGMIPDCPLD
KVTSAGNAAG TGARIALLNT DARQEIEDTV RKIEKVETAV EPRFQEHFVN ASAIPNSAEP
FPILQSVVSL PEVSFNSAGA DAARSGGRRR RRGG
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