| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1225 |
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| Symbol | |
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| ID | 4075933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1317194 |
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| End bp | 1318342 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006533 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_613220 |
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| Protein GI | 99081066 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0131268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGCCC CCCTCGACGG ATTGATCATT CTCGACCTCA CACATGTTCT TGCCGGGCCC
TATGCCTCCA TGACGCTTTC GGATCTCGGC GCGCGGGTCA TCAAGGTGGA ACGCCCTGGC
GTTGGTGACG ACACCCGCGC CTTTCCGCCG TTCAAAGACG GCGAGAGCGC CTATTTTGCA
ACCATCAATC ATGGCAAGGA AAGCATCGCG CTCGACCTCA AGAATGCCAA GGACCGTATT
GTTTTTGAAG AGCTACTTCA AAAATCGGAT GTGGTTCTTG AGAACTATCG CCCCGGTGTG
ATGGAACGCC TCGGATATGG TTGGGATGAC CTTCACCCCA AGTACCCCAA GCTCATCTAT
GGTGCGGTTT CCGGCTTTGG TCACAGTGGT CCCGACAGTC AGCGCCCCGC CTACGACATG
GTGGTGCAGG CCCGCGGCGG CGTGATGTCG ATCACCGGTG AACGAGACCG CGAACCTGTG
CGCGTGGGCG CCTCTATCGG AGACATCGCC GCCGGTATGT TTCTGGCGCA AGGGATCCTG
GCCGCCCTGT TGCAGCGCGA GAAAACCGGT GAAGGACAAA AGATCGACAT TGCCATGCTT
GATTGCCAAC TCGCCATGCT GGAACATGCA ATTGCACTGA CCACCATAAG CGGCGAGGCG
CCCCGGCCCT CGGGGGCAAG ACATCCCTCG ATTACCCCGT TTGAGACCTT TCATGCGGCA
GATGGGCTGT TTGTAATCGC GGCAGGAAAT GACGTTCTGT TTGCCCGGCT CTGCGAGGCA
TTGGAGTTGC CCATTGCGCA GGATGAGCGC TTTGCCACCA ATCCCGCAAG ATGCGAAAAT
GCGCGCCTTC TCAAGCGGTT GATCGAAGCA GTTACACTGG AGCATGGCAA ACGGCACTGG
ATCGACCTAC TGACCAAAGC TGGGGTGCCC ACAGGGCCGA TACAGAATGT GGCCGAGGTG
CTGGAGGACC CGCAGATCCG GGCACGCAAC ATGGTGGTGG ATGTGCTCGA TCGGGACGGA
AACCCGGCCT ATGTGGCGGC AGGCAACCCA ATCAAGATGA GCGCGCTCAA GGACCCAAGC
ACCCGCCCCG CCGCACCCAA GCTGGACGAG AATCGCGAAG AGATCCTGAC GTGGCTGAGA
GAGGCCTGA
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| Protein sequence | MLAPLDGLII LDLTHVLAGP YASMTLSDLG ARVIKVERPG VGDDTRAFPP FKDGESAYFA
TINHGKESIA LDLKNAKDRI VFEELLQKSD VVLENYRPGV MERLGYGWDD LHPKYPKLIY
GAVSGFGHSG PDSQRPAYDM VVQARGGVMS ITGERDREPV RVGASIGDIA AGMFLAQGIL
AALLQREKTG EGQKIDIAML DCQLAMLEHA IALTTISGEA PRPSGARHPS ITPFETFHAA
DGLFVIAAGN DVLFARLCEA LELPIAQDER FATNPARCEN ARLLKRLIEA VTLEHGKRHW
IDLLTKAGVP TGPIQNVAEV LEDPQIRARN MVVDVLDRDG NPAYVAAGNP IKMSALKDPS
TRPAAPKLDE NREEILTWLR EA
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