| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1212 |
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| Symbol | |
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| ID | 4075920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1301262 |
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| End bp | 1302017 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006519 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_613207 |
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| Protein GI | 99081053 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGT CTGAGTATTT GCAACAACTG ACCCAGTTCA AAACCATCGA GGAGTTGTGG
CGCGCGCATG TCCAACAAAT GAGCCGCTAT GGTTTTGATC GCCTGCTCTA TGGCTACACG
CTGTTCAAGA CACGCACCTC GTTGGGGGAT CCGGATGATT TTGTGATCCT GACCAACCAT
TGCCCAGAGT ATCTGCAGGG CTTTCTTGCC GATGGGCTAT ACGCACATGC GCCGATGCTG
ACCTGGGCCT TGGAGAACGA GGGCCATGCA AGCTGGCGCG TGTCGCAGGA GATGGCCGCG
CAGGGGCTCT TGGACAAACA GGCCCGCAAA GTGCAGGACT TCAATCAATC CATGGGCGTG
CATGCCGGGT ATACGATCAG CTTCAACTCC GCCTCAGAGC GCTTCAAGGG GGCGATCTCA
CTGGCGGCGC GCGCGGACCT CGATCAGGAT GGAATCGATC AGATCTGGGC CGAGCATGGC
GCGGACATCG TGTTGATGAA CAATGTGGCG CATCTCAAGA TTCTGACCCT GCCCTACCAC
GCACCGAAAC GCGGCCTGAC CAAGCGACAG CGCGAGGTGC TGCAATGGGT GGGCGACGGC
AAAACCACTC AGGACATCGC GCTCCTGATG GGGCTGACGC CCGCGACGAT CGAAAAGCAC
CTCCGTCTGG CACGCGCGAC ACTGAGTGTT GAAACAACGG CCCAGGCTGT GCTGAAGGCG
GCATTGCACA ATCAAATGTA TGCGGTCGAG CATTAA
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| Protein sequence | MTLSEYLQQL TQFKTIEELW RAHVQQMSRY GFDRLLYGYT LFKTRTSLGD PDDFVILTNH
CPEYLQGFLA DGLYAHAPML TWALENEGHA SWRVSQEMAA QGLLDKQARK VQDFNQSMGV
HAGYTISFNS ASERFKGAIS LAARADLDQD GIDQIWAEHG ADIVLMNNVA HLKILTLPYH
APKRGLTKRQ REVLQWVGDG KTTQDIALLM GLTPATIEKH LRLARATLSV ETTAQAVLKA
ALHNQMYAVE H
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