| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1187 |
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| Symbol | |
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| ID | 4077796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1276546 |
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| End bp | 1277559 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006493 |
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| Product | sugar ABC transporter (sugar-binding protein) |
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| Protein accession | YP_613182 |
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| Protein GI | 99081028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.287912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAATT TCAAACAGGT GGCCGTCTGC GCCGCAGCGT CCATGACCAC GGTTCCCGGA
GCCGCTCTGG CGGAGGCGGG AACGCTCAAA TGCGAGCCGG GTGAAACCTA TATCATGAAT
GTGATGGTCT CGAGCCATCC TTATTGGGTG CCAGTCTATC AGGGCTTCAA GCAGGCTGCA
GAGGCTTTTG GTTGCGAGAC CGTGTTCTCC GGCACGCCTG ATTATGACAT CACCAAGCAG
ATTGCGTCCT TTGAGCAGGA TATGGTGAAG GCACCCGCAG GCATTCTGTT GCATCCGATG
CAGTCTGACC CCTTCATCGA GCCCATCAAC CGCGCCATCG ATAACGGCAC CGAAATCGTG
ACCTTTGCGG CGGACTCGCC CAATTCCAAG CGCTCTGGCT ATATCACCTC CGACAATATG
GCGGAGGCCA AGTTTGCCGC CGAGGAATTT GTCAAAGAAC TGGGCGAGAG CTTTGAGTTT
GCAGTGCTCG AGAACCCGGG TCAGTCCAAC CACGACCTGC GCGTCACCGC ATTCCTGTCT
TACATGGAAG AGCATTATCC GGAGGCCAAG CTGGTGGGGC GTCAGGCCAC CAACCAGGAC
AGCAACGCGG CCTATCGCGC CACCGCGTCG ATCATACAGG CCAATCCGGA CCTGAAGGCC
CTGTGGATCC CAGAGGCAGG ATCGGCAGAG GGCGCCGTCG CGGCCAAGCT CGAGGCGCAG
TCCGATGTGA TGGTGATGCA TGCCGATATC ACCCCGACCA CGCTTGAGCA CATCAAGGCG
GGCAACATCC ATGCGGCTTT GAACCCGAAC CAGGGCATGC AGGGCTTTAT GGGGTTCATG
GGGGTCTTCC TCGCAGCAAA ATCCGAGGTG TTTGATCCGT TCAACGACTA CAAGGTCTCT
GGCTACAACC CGGTGCAGAT CCCGTTTGTT GACAATGGCT TTGCCGTGAT CACGCAAGAG
AACGCCGACA GCTTTGATCT CAACGCCTAT ATGGCCGGTC GCGATCCCAG CTGA
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| Protein sequence | MVNFKQVAVC AAASMTTVPG AALAEAGTLK CEPGETYIMN VMVSSHPYWV PVYQGFKQAA
EAFGCETVFS GTPDYDITKQ IASFEQDMVK APAGILLHPM QSDPFIEPIN RAIDNGTEIV
TFAADSPNSK RSGYITSDNM AEAKFAAEEF VKELGESFEF AVLENPGQSN HDLRVTAFLS
YMEEHYPEAK LVGRQATNQD SNAAYRATAS IIQANPDLKA LWIPEAGSAE GAVAAKLEAQ
SDVMVMHADI TPTTLEHIKA GNIHAALNPN QGMQGFMGFM GVFLAAKSEV FDPFNDYKVS
GYNPVQIPFV DNGFAVITQE NADSFDLNAY MAGRDPS
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