| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1185 |
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| Symbol | |
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| ID | 4077794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1274224 |
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| End bp | 1275156 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006491 |
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| Product | metF protein-like |
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| Protein accession | YP_613180 |
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| Protein GI | 99081026 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.402537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGC TGAACTTCAA AAAACGTGCG GCTGACACAG AGATCACCGT GAACCCGGAC
GTGGAGGCCT TTCTGCAGGG CTATTCCATC GAGGTGATGC CGCGCACCGC GCAAAAGGTC
GAGGACTTCC GCGAGCTTCT GCCCGCCGGC ACCCGAGTCT ATATTGCCCA CATTGAGGGC
ACCCCGATCG AGGATATGAT CGCCACAGCC AAACGCCTGA ATGACGAAGG CTACCCGGTG
ATGCCGCATT TCCCGGCCCG CATCATCAAG GATGAGGCAA CGCTTGCCGA TTGGATTGCG
CGCTATCAGG GTGAGGCGGA TGTCAAACAG GCCCTGCTGC TGGCCGGTGG CGTGGCGCAG
CCTCATGGTG CCTTTGACAG CTCCATGCAG CTTTTGGAGA CCGGCCTCTT CGACAAGGCA
GGGTTCACCA ACCTGCATGT GGCGGGCCAC CCCGAGGGCA ACAAGGATAT TGATCCCGAC
GGCTCCATGA AAAACGTCTC CGAAGCGCTT CAGTGGAAAC AGAAATTTTC CGAGCGGACC
GACGCGAAAA TGGCGCTGGC AACCCAGTTT GCATTTGAGG CAAAGCCGAT CATCGCCTGG
GCGAACGGCC TGAAAGACGC GGCCGTTGAC CTGCCGATCC ATATCGGGAT CGCGGGGCCT
GCCAAGCTGC AGACGCTCAT TAAATTCGCC ATTGCCTGCG GTGTGGGACC GTCGCTCAAG
GTGCTTCAGA AACGCGCCAT GGATGTCACC AAGCTGATGC TGCCCTATGA GCCCAACGAG
GTTGTGGCTG AGCTTGCGGC CTACAAGGCG GCAAACCCCG ATTTCAACAT CACCAATGTT
CACTTCTTCC CGCTCGGCGG CATCAAAACC AACGCCACCT GGGCCATCAA CAATGGCGGC
GAGTCCACTC GCCCCGCCAA ACAGCAAGGA TAA
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| Protein sequence | MALLNFKKRA ADTEITVNPD VEAFLQGYSI EVMPRTAQKV EDFRELLPAG TRVYIAHIEG
TPIEDMIATA KRLNDEGYPV MPHFPARIIK DEATLADWIA RYQGEADVKQ ALLLAGGVAQ
PHGAFDSSMQ LLETGLFDKA GFTNLHVAGH PEGNKDIDPD GSMKNVSEAL QWKQKFSERT
DAKMALATQF AFEAKPIIAW ANGLKDAAVD LPIHIGIAGP AKLQTLIKFA IACGVGPSLK
VLQKRAMDVT KLMLPYEPNE VVAELAAYKA ANPDFNITNV HFFPLGGIKT NATWAINNGG
ESTRPAKQQG
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