| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1182 |
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| Symbol | |
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| ID | 4077791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1271718 |
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| End bp | 1272434 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006488 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_613177 |
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| Protein GI | 99081023 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0325748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA AACCAACAGG AAAGAACACC TCTGGCCGGG GCCAGCGGGA TCTGACCGTC
AAGGTCAAGA CCGCGCGTGG GCGCCGACTG AGCTCGACCC GCTGGCTGCA GCGGCAGCTC
AATGATCCAT ATGTCAAACG GGCGCAGGCC GAGGGCTATC GCGGACGCGC GGCGTTCAAG
ATCATGGAAC TCGACGACAA ATACCGCTTT CTTGTGCCCG GGGCCCGGGT TGTTGATCTG
GGCTGTGCGC CGGGCGGTTG GGCACAGGTG GCGGTGCCGC GCATCAATGC GCTGGGCGAG
AAATCCGGCA AAGCCATTGG ACGTTTCATC GGCATTGACC TGCAAGAGGT CGAACCACTT
GCAGGCGCCG AGTTCCATCA GCTCGACTTT ATGGACGAAG GCGCGGACGA TCAGGTCAAG
GAATGGTTAG GCGGTCAGGC GGATGTGGTG ATGTCGGACA TGGCGGCCTC CAGTTCGGGG
CACAAGCAGA CGGACCACCT GCGGATTATG TCTCTCTGCG AGACCGCTGC CTATTTCGCC
TTTGATGTAC TCGAGGAAGG CGGCACCTTT GTCGCCAAGG TTCTGGCCGG TGGTGCCGAA
GGCGAACTGC AAAAGCTGCT GAAGCAGAAA TTCAAATCCG TCGCCAATGT AAAGCCGCCC
TCCTCACGGG CTGACAGTTC GGAGAAATTT GTTGTGGCGA CAGGCTTTAG AGGCTGA
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| Protein sequence | MAKKPTGKNT SGRGQRDLTV KVKTARGRRL SSTRWLQRQL NDPYVKRAQA EGYRGRAAFK
IMELDDKYRF LVPGARVVDL GCAPGGWAQV AVPRINALGE KSGKAIGRFI GIDLQEVEPL
AGAEFHQLDF MDEGADDQVK EWLGGQADVV MSDMAASSSG HKQTDHLRIM SLCETAAYFA
FDVLEEGGTF VAKVLAGGAE GELQKLLKQK FKSVANVKPP SSRADSSEKF VVATGFRG
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