| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1180 |
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| Symbol | |
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| ID | 4077789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1270487 |
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| End bp | 1271353 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006486 |
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| Product | ribonuclease BN, putative |
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| Protein accession | YP_613175 |
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| Protein GI | 99081021 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.012264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGA TTGGCCAAGC CGTGATACAG GCTCTCGTGA TTGCGCGCCG CGCGCTCGGG
CGCTTCAGCC GCAAGAATGC ATGGGTGCTG AGCAGCCATA TCGCCATGTC GATGATGATG
GCACTCTTTC CTTTTGTTCT CTTCACGGTG TCGCTGAGCG GCGCCATCGC CAGCCTGTTT
TCCCATCGCA TCGTTGTGGA TGACGTGGTC AATCTGGTGT TTGGCAGCTG GCCGCAGTCG
GTTGCTGAGC CGATCACCCG CGAGGTCTAT GCCGTGCTCG AGACCTCTGG CACTGGCCTC
ATGACCCTTG GCGGGGTGCT GGCGCTCTAT TTTGCCTCCA ATGGTGTGGA TGCGATCCGT
ATCGCGATGC TCAGAGCCTA CGGTCAGGAA GAAACACGTC CCTTCTGGAA GCACCGCCTG
ATCTCCTTGG GGCTGGTGAT CCTGGGCGGA GCAGGGCTGC TGCTGACAGC AGTGTTTGAA
CTGTTCTTGC CGCTGGGGGC GCGCTTTGTG GGGCGTTTCT TTCCGGATCT CGATTTTCTG
CGAGGCTGGG AGCAGGGCGC CAACGGGCTT GTTGTGGCCG TGATCCCGGT GGCGGCGGTG
TTCCTCTATC ACCTTGTTCT TCTGCCAAAG CGTGAAACCC TGCGCCATGT GCTGCCAGGG
GCGCTCGTGA CGCTCGTGTT GTGGTGGGCG TCTGGTGCCG GGTTTGCGTT CTATGTCTCG
AGTTTTGCAA GCTATTCTGC CACCTATGCG GGGCTTGCGG GGGCGATGGC GGCGCTGATC
TTTCTGTACC TCAATGCAGC GATCCTGATC CTTGGTGCCG AGATCAACGG GGTCCTGCAA
ACCGACCGAC AGGCGCGCGA TGCCTGA
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| Protein sequence | MMAIGQAVIQ ALVIARRALG RFSRKNAWVL SSHIAMSMMM ALFPFVLFTV SLSGAIASLF
SHRIVVDDVV NLVFGSWPQS VAEPITREVY AVLETSGTGL MTLGGVLALY FASNGVDAIR
IAMLRAYGQE ETRPFWKHRL ISLGLVILGG AGLLLTAVFE LFLPLGARFV GRFFPDLDFL
RGWEQGANGL VVAVIPVAAV FLYHLVLLPK RETLRHVLPG ALVTLVLWWA SGAGFAFYVS
SFASYSATYA GLAGAMAALI FLYLNAAILI LGAEINGVLQ TDRQARDA
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