| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1173 |
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| Symbol | |
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| ID | 4077782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1262504 |
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| End bp | 1263646 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006479 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_613168 |
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| Protein GI | 99081014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.113377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.236681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG CAGACGATTT CGGCTTTGGC ACCCAGATCC GCAAATCCCC GTATTTCGAC
GCCACCGTGC GTTGGGGAGC AAAGGGTTTT TCCGTTTACA ATCATATGTA TATCCCGCGC
GACTTTGGCG ATCCGGAGCA GAACTTCTGG AACCTCGTCA ACGATGCAAT CCTATGCGAT
GTCGCGGTCG AGCGCCAGGT GGAGATCACC GGACCGGATG CGGCAAAATT CGTTCAGATG
CTCACTCCGC GCGACCTGTC GACCATGGCC GTGGGTCAGT GCAAATACAT CCTGATCACC
AATGCCGAAG GCGGCATCTT GAACGACCCG ATCCTGCTGC GGCTGGCTGA AAACCACTTC
TGGATTTCGC TTGCTGACAG CGACATCCTG CTCTGGGCGC AGGGCGTGGC GGTGCACTCT
GGCCTGGATG TGCAGATTTG CGAACCGGAC GTCTCTCCGC TGCAGCTGCA GGGGCCGAAA
TCTGGGCTGG TGATGCAGGA GCTCTTTGGC GAGAGCATCA TGGACCTCAA ATACTACTGG
CTGCGCGAAC TCGACCTCGA TGGTATCCCG TTGATTGTCT CGCGCACCGG CTGGTCGAGC
GAGCTTGGCT ATGAGCTCTA TCTGCGCGAC GGAAGCCAGG GCGACGCACT CTGGGAACGG
ATCATGGCGG CGGGGATGCA GCATGGTTTG AAGCCGGGCC ACACCTCCTC CATTCGCCGG
ATCGAAGGGG GCATGCTCTC TTATCATGCG GATGCCGATA TTCACACCAA CCCCTTCGAG
CTGGGCTTTG ACCGGCTTGT AAACCTCGAC ATGGAAGCCG ACTTCATCGG CAAGGCGGCG
CTCAAGCGCA TCCAAAAGGA AGGTCCCGCA CGCCTGCAGG TTGGTCTGGT AATCGACGCC
GCACCGCTGC GGGGGCCCAA CACCACGTTC TGGCCGATCA CCAAGAATGG CGAAACCATC
GGCAAGGTCA CATCCGCCGT CTATTCCCCG CGCCTTGAAA AGAACATCGC CCTGGCGATG
GTGGACGCCG AACACGCGGT GATCGGCAGC GACGTTGAGG TGACAATGAC CTCGGGTGCA
ACCTCTGCCA GCGTTGTGGA GCGTCCCTTC TTTGATCCGC GCAAGCAGAT TGCCGCCGCC
TGA
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| Protein sequence | MTQADDFGFG TQIRKSPYFD ATVRWGAKGF SVYNHMYIPR DFGDPEQNFW NLVNDAILCD
VAVERQVEIT GPDAAKFVQM LTPRDLSTMA VGQCKYILIT NAEGGILNDP ILLRLAENHF
WISLADSDIL LWAQGVAVHS GLDVQICEPD VSPLQLQGPK SGLVMQELFG ESIMDLKYYW
LRELDLDGIP LIVSRTGWSS ELGYELYLRD GSQGDALWER IMAAGMQHGL KPGHTSSIRR
IEGGMLSYHA DADIHTNPFE LGFDRLVNLD MEADFIGKAA LKRIQKEGPA RLQVGLVIDA
APLRGPNTTF WPITKNGETI GKVTSAVYSP RLEKNIALAM VDAEHAVIGS DVEVTMTSGA
TSASVVERPF FDPRKQIAAA
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