Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1171 |
Symbol | |
ID | 4075957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1261221 |
End bp | 1262021 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638006477 |
Product | enoyl-CoA hydratase |
Protein accession | YP_613166 |
Protein GI | 99081012 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.277406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.140029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGG ATGCAATCCT CCTCAAGCAA TTGAGCGAGA CCGGCGTGCT GCGCCTCACG CTGAATGATG TCGCGCGCCG CAATGCACTC TCCGAGGCGA TGCTGGGCAC GCTCGGCGAG GCCTTAGCCA GCGCGGGTCA GGACCCCGCG GTACGTGTGG TGGTGCTTGC GGCAAATGGC CCTGCGTTCA GCGCAGGTCA TGACCTAAAG GAGCTGACCC GCGGCCGCGC GGCGCCGGAT GGCGGCAAGG CCTATTTTGC GCGGATCATG GCGCTTTGCT CGGCCGTCAT GCAGAGCATT GTGACCTGCC CCAAACCCGT CATCGCCGAA GTCACCGGCG TCGCGACCGC TGCGGGCTGT CAGCTTGTGG CCAGCTGCGA CCTCGCGATC GCCGCCGAGA GCGCACGCTT CAGCACGCCG GGTGTTCACA TCGGGCTGTT TTGCTCCACC CCGATGGTTG CCTTGTCCCG CAATGTGGCT GGCAAACACG CCATGGAAAT GCTGCTGACG GGCGACATGA CCTCTGCGGA GCGCGCCGCC GAGATCGGTC TTGTCAACCG CGTCACCTCC GAAGACGGCT TGCAGGACGC GGTGCTGGAA CTGGCGCATA AGATCGCGTC CAAATCCTCC ATGACGCTCG CCACTGGCAA GCAGGCGTTT TATGCGCAGC GCGAAATGCC CCTGTCGGAC GCCTATGACT ATGCAGCGGA CGTGATGGTC AAAAACATGT TGGCGCAGGA TGCCGCAGAA GGCATCAATG CCTTTGTCGA AAAACGTTCC CCGCAATGGC AGGATGCATA A
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Protein sequence | MQTDAILLKQ LSETGVLRLT LNDVARRNAL SEAMLGTLGE ALASAGQDPA VRVVVLAANG PAFSAGHDLK ELTRGRAAPD GGKAYFARIM ALCSAVMQSI VTCPKPVIAE VTGVATAAGC QLVASCDLAI AAESARFSTP GVHIGLFCST PMVALSRNVA GKHAMEMLLT GDMTSAERAA EIGLVNRVTS EDGLQDAVLE LAHKIASKSS MTLATGKQAF YAQREMPLSD AYDYAADVMV KNMLAQDAAE GINAFVEKRS PQWQDA
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