| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1168 |
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| Symbol | |
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| ID | 4075954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1256394 |
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| End bp | 1256972 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006473 |
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| Product | DedA family protein |
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| Protein accession | YP_613163 |
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| Protein GI | 99081009 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1238] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0232351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTC GCCTATATGA CCGGACCATG GCCCTTGCCG ACCATCCCCA TGCGCTGTGG
TGGCTGGCCG GTGTGGCCTT CATCGAAAGC TCCGTTTTTC CGATCCCGCC CGATGTGCTG
ATGATCCCGA TGATCCTTGC GCGGCCCTCT CGCGCCTGGC TGATCGCCTT GGTGGCGCTG
TTTTCCTCGG TGGCCGGCGG GCTCATGGGC TACGCAATCG GCGCCTTCTT TTACGAAGGC
ATCGGCCAAC CGATCCTCGA GGCCATGGGC AAGGCCGACA AGATGGTCGA ATTCAACGAG
CGTTTTAACG ACTTTGGCTT CTGGGCGGTG CTGATCGCTG GGGTGACACC CTTCCCCTAC
AAGGTCATCA CCATCATGTC GGGCTGGACG GGCATGCCGA TCATGACATT CGTGGTCACA
TCGTTGCTGG CACGGGCGTT GCGGTTCTTC CTCGTGGCCG GGCTCTTGTG GCAATTTGGC
GCGCCAGTGC GGGAGTTTAT TGAAAAACGC CTGGGGCTGG TGTTCACCGT CTTTTGTGTG
CTGCTGTTTG GTGGCTTTCT TGCACTGAGG TATCTATGA
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| Protein sequence | MLRRLYDRTM ALADHPHALW WLAGVAFIES SVFPIPPDVL MIPMILARPS RAWLIALVAL
FSSVAGGLMG YAIGAFFYEG IGQPILEAMG KADKMVEFNE RFNDFGFWAV LIAGVTPFPY
KVITIMSGWT GMPIMTFVVT SLLARALRFF LVAGLLWQFG APVREFIEKR LGLVFTVFCV
LLFGGFLALR YL
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