| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1157 |
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| Symbol | |
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| ID | 4075943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1248737 |
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| End bp | 1249369 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638006462 |
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| Product | HhH-GPD |
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| Protein accession | YP_613152 |
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| Protein GI | 99080998 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.018776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGG GCCGCCTGAT CGAGACCCCG GCCTGCGTGG CCGAAGGGGC TGCCTGGCTG
GCGGCGCAAG AGCCACGCTT TGCCGAAGCG CTCGCGCAGA CCGGGGACTT GCCGCTGCGG
CGCAAGCCTG ACGGGTTTGC ACAGCTTCTC AGCGCCATTG TCAGCCAGCA GGTCTCGGTG
GCGTCGGCCA ATGCGATCTG GGCGCGGATG CGGGCCGCCA ATCTTACTGG GCCGCGCAAG
ATCCAATGGG CCAGCGACGA GGATCTGCGC GCGGCCGGAC TCAGTCGCCA GAAGATCCGC
TATGCCCGTG CCCTGTCGGA GGCACGCATT GATTTCAAGG CGTTACGGCA CGCTCCTACA
GCGGAGGTGA TCGCCGAACT GACACAGGTT TCAGGGATCG GGGTCTGGAC GGCAGAGATT
TACGCGATGT TTTCCTTGGG GCGCGCTGAT GTCTTTGCGC CTGGCGATCT GGCCCTGCAA
GAGAGCGCGC GGATGCTTTT TGATCTGTCC GAGCGCCCCA AAGAGCGCGC CCTGCGCGAG
ATGGCAGAGG CCTGGTCACC GTGGCGCTCG GTTGCGGCGC GGCTTTTGTG GGCCTATTAC
CATGTGGCAA AGGACAGGGA AGGGATCCGA TGA
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| Protein sequence | MTVGRLIETP ACVAEGAAWL AAQEPRFAEA LAQTGDLPLR RKPDGFAQLL SAIVSQQVSV
ASANAIWARM RAANLTGPRK IQWASDEDLR AAGLSRQKIR YARALSEARI DFKALRHAPT
AEVIAELTQV SGIGVWTAEI YAMFSLGRAD VFAPGDLALQ ESARMLFDLS ERPKERALRE
MAEAWSPWRS VAARLLWAYY HVAKDREGIR
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