| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1149 |
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| Symbol | |
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| ID | 4078445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1236516 |
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| End bp | 1237055 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006453 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_613144 |
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| Protein GI | 99080990 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000107907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.195461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGATG ATCTGAGCAG TTTGCAGCAT GTCCGTGGAC TAGTGAAGTG GTTTGACCCC
GCTAAGGGGT ATGGATTCAT TGTCTGTCCT GACGATGGTC CCGATATTCT CTTGCACGTG
AACGTCCTGC GTAACTTCGG GCAAAGCTCT GTCGCGGATG GCGCCGGGAT CGAGGTTGTG
ACCCATCGCA CGGATCGCGG TGTGCAGGCG GTTGAAATCG TATCCATTAC CCCACCGGAG
CGCGAGGACA CCCCCGTCCT GAGTGATCTG GCACAGCTGG ATGACGAGGA GCTCAGCAAC
ACACCGCTGG AGCCTGCGCG CGTGAAATGG TTCGACAAAG CCAAAGGGTT TGGCTTTGCC
AATGTGTTTG GCCGCGACGA AGACGTGTTC CTGCATGTCG AAGTGCTGCG CCAGTCGGGG
CTCTCTGACG TGCAGTCCGG CGAGGCACTG GCGATGCGCG TGATCGACGG CAAACGTGGC
CGGATGGCTG TGGATGTGCT TGCCTGGGAG GCAGCCTCTT CAGACACCAG CAGCGTCTGA
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| Protein sequence | MADDLSSLQH VRGLVKWFDP AKGYGFIVCP DDGPDILLHV NVLRNFGQSS VADGAGIEVV
THRTDRGVQA VEIVSITPPE REDTPVLSDL AQLDDEELSN TPLEPARVKW FDKAKGFGFA
NVFGRDEDVF LHVEVLRQSG LSDVQSGEAL AMRVIDGKRG RMAVDVLAWE AASSDTSSV
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