| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1148 |
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| Symbol | |
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| ID | 4078444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1235783 |
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| End bp | 1236388 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006452 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_613143 |
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| Protein GI | 99080989 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000148678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.197095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATC GTGAAGGACT CTTTGGCGGC GATGATCCGT TTGAGATCGC CCGCAAGTGG
CTGGCAGAGG CCACCGAGAC CGAAATCAAC GACCCCAATG CCATTGCGCT TGCGACCGTG
GATGCCTCCG GCATGCCCAA CAGCCGCATG GTGTTGCTGA AGGAAATCGA AGACGCTGCC
TTTGTGTTCT ATACCAACTA TGAGAGCGCC AAGGCACAGG AGATCGAGGC CAGCGGCACC
GCGTCCTTTG TGATGCACTG GAAATCCCTG CGTCGCCAGA TCCGCGTGCG CGGACATGTC
ACCAAGGAAA ACGGACCGCA GGCGGATGAG TATTTTGCGT CCCGCTCGCT CAAGAGCCGT
CTTGGGGCCT GGGCCTCCAA GCAGTCGCAG CCGCTCGCCT CGCGCAGCGC CCTGATGGCA
GAGGTGGCCA AGATCACTGC CCAGAAAGGT CCAAATCCGA AGCGCCCGGA ATTCTGGGGC
GGCTACCGGA TCACACCGAT TGAAATTGAA TTTTGGGCGG ATGGGGCCTT TCGATTGCAC
GACCGTTTTG TGTGGCGAAA AAATACTTCA CATGATAATT GGACAATCAC GCGTCTTAGC
CCGTAA
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| Protein sequence | MSDREGLFGG DDPFEIARKW LAEATETEIN DPNAIALATV DASGMPNSRM VLLKEIEDAA
FVFYTNYESA KAQEIEASGT ASFVMHWKSL RRQIRVRGHV TKENGPQADE YFASRSLKSR
LGAWASKQSQ PLASRSALMA EVAKITAQKG PNPKRPEFWG GYRITPIEIE FWADGAFRLH
DRFVWRKNTS HDNWTITRLS P
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