| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1138 |
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| Symbol | trpC |
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| ID | 4078434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1224499 |
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| End bp | 1225308 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006442 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_613133 |
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| Protein GI | 99080979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.69839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAGA CCATCCTCGA CAAAATCAAG GCCTACAAGC TCGAAGAGGT CGCCACCGAC
AAAGCCGCCA AACCTCTTGC GGATGTCGAA GCCGAGGCCC GCGCCGCAGA TCCCGTACGC
GGCTTTGCCG AGCGTCTACA AAAGGCCACG CATCAGGGCT ATGGACTGAT TGCCGAAATC
AAAAAAGCGA GCCCTTCCAA GGGTTTGATC CGCGAAGATT TCGACCCTGC CACGCTCGCT
ACAGCCTATG CCGAAGGGGG CGCGAGCTGT CTTTCGGTGC TGACAGATAC GCCGAGTTTT
CAGGGCGCAA AGGACTATCT GGTGGCGGCG CGCGCGGCCT GCGATCTGCC CTGCCTGCGC
AAGGATTTCA TGTACGACAC CTATCAGGTG GCCGAAGCCC GCGCGCTTGG CGCCGACTGT
ATCCTGATCA TCCTCGCCTC TGTCAGCGAT GCACAAGCGG CCGAGCTCGA AGCCTGCGCC
TTTGAATGGG GCATGGACGT GCTCTTGGAG GTCCACAACG AAGAAGAACT GGACCGCGCC
TGCCTGTTGA AATCGCCCCT CATGGGCATC AACAACCGCA ACCTCAAGAC CTTTGAGACC
ACGCTCGACA CCACCCGCAC CCTGTCGCGG ATGGTGCCGC CGGATCGCAC GATCGTCTGT
GAAAGCGGCC TGTTCACGCC CGAGGATCTG GCCGACATGG CCCAGTATGG CGCGCGCAGC
TTCCTCATCG GTGAGAGCCT GATGCGTCAG GAGGATGTGA CCGCCGCCAC CCGCGCGATC
CTTGCAAACC CGCTGACCCC CTCGCTCTGA
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| Protein sequence | MSETILDKIK AYKLEEVATD KAAKPLADVE AEARAADPVR GFAERLQKAT HQGYGLIAEI
KKASPSKGLI REDFDPATLA TAYAEGGASC LSVLTDTPSF QGAKDYLVAA RAACDLPCLR
KDFMYDTYQV AEARALGADC ILIILASVSD AQAAELEACA FEWGMDVLLE VHNEEELDRA
CLLKSPLMGI NNRNLKTFET TLDTTRTLSR MVPPDRTIVC ESGLFTPEDL ADMAQYGARS
FLIGESLMRQ EDVTAATRAI LANPLTPSL
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