| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1135 |
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| Symbol | |
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| ID | 4078431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1221954 |
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| End bp | 1222679 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006439 |
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| Product | LexA repressor |
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| Protein accession | YP_613130 |
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| Protein GI | 99080976 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.725643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACGA AAAAACAGCT TCAGCTACTG GAGTTTATTC ACAAGCGTCT GCAGAAGGAT
GGCGTCCCTC CCAGTTTTGA TGAGATGAAA ACCGCGTTGG ATCTGCGGTC CAAGTCCGGC
ATTCACCGTC TGATTACGGC GCTGGAAGAG CGCGGCTTTA TCCGCCGCCT TGCCCATCGC
GCGCGCGCCA TCGAGGTGAT CCGCCTGCCC GACAGTCTGG GCGGTGGCGG CGCGCTTGGT
GCTGCGAGCG ATGGTTTCCA GCCCAAAGTG ATCGCCGGCG GCCGGGGTGA CAGTGCCGAC
GGCGGCGCTG CGGCAGAATT GAAACCCGTG GCAGATACCG GGGCGACGGA ACTCACGATC
ATGGGCCGGA TCGCAGCCGG TGTCCCGATC GAGGCGATCA ACCAGGCCGC CGCCCATGTG
GCGGTGCCCA ATGCCATGCT CTCCAGCTCG GGTCAGCATT ACGCCCTCGA GGTGCGCGGT
GACTCGATGA TCGACGCCGG GATAAACGAC GGCGATGTGG TGGTGATCCG CGAGACCGAC
GCGGCCGACA ATGGCGACAT TGTGGTGGCC CTCGTGGAGG GGCATGAGGC CACGCTCAAA
CGGTTTGAAC GCAAGGGCCG CATGATCGAG CTTCACGCCG CCAATCCGGC CTACCCCACC
CGCAGCTATA CCGAGGATCA AGTGAAGGTG CAGGGGCGTC TGGTGGGGCT GATCCGCACC
TACTGA
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| Protein sequence | MLTKKQLQLL EFIHKRLQKD GVPPSFDEMK TALDLRSKSG IHRLITALEE RGFIRRLAHR
ARAIEVIRLP DSLGGGGALG AASDGFQPKV IAGGRGDSAD GGAAAELKPV ADTGATELTI
MGRIAAGVPI EAINQAAAHV AVPNAMLSSS GQHYALEVRG DSMIDAGIND GDVVVIRETD
AADNGDIVVA LVEGHEATLK RFERKGRMIE LHAANPAYPT RSYTEDQVKV QGRLVGLIRT
Y
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