Gene TM1040_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1130 
Symbol 
ID4077251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1214788 
End bp1215567 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID638006434 
Productshort chain enoyl-CoA hydratase / enoyl-CoA hydratase 
Protein accessionYP_613125 
Protein GI99080971 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC GCGACATTCA GTATTCGCTT GAGAACGGGC TTGCGACCGT CACTTTGAAC 
CGCCCGCAGA GCATGAATGC GCTCACCAGC CAGATGCGGG CGGAAATCAC CCATGCGATG
AAAACCGCCG CCGAAGAGGC GCGTGCGGTG GTGATCACCG GCGCTGGCAA TGCCTTTTGT
ACCGGTCAGG ACCTGAAGGA TGCCTCCTCG AGCGGCAACC AGATCGATCT GGAGCGTACG
CTGCGTGACG AATACACGCC CATGCTGGAA GCGATCTACA CCTGTCCAGT GCCGACGATC
TCTGCTGTGA ATGGTCCGGC AGCAGGGGCG GGCGCCAATC TGGCACTGGC GGCGGATGTG
GTGATCGCAA CCGAGAGCGC CTATTTCCTG CAGGCCTTTG CCAAGATCGG GTTGATGCCG
GACGCCGGCG GTACTTGGTT CATGCCGCGC CAGATGGGGC TGGCCAAGGC CATGGGCGCG
GCGCTGTTTG CCGACAAGAT CACCGCCCGT CAGGCGAGCG ATTGGGGCAT GATCTGGGAA
GCGGTTGCGG ATGACGGGTT TGAGGCGCAT TGGCGCGCCC GTGCCGCGCA CCTGGCCTCT
GGTCCCTCCA AGGCCTTTGG CGCCATCAAG CAGGCGCTGC GCCAATCCAC CACCAACAGC
CTGCCAGATC AGCTGTCGCT GGAGGCGCAT CTGCAGGGGG AACTGGGCCG CAGCCGCGAT
TTCATGGAGG GCGTCACCGC CTTTGTGGAA AAGCGCAAAC CGGATTTCGA GGGGCGCTGA
 
Protein sequence
MDYRDIQYSL ENGLATVTLN RPQSMNALTS QMRAEITHAM KTAAEEARAV VITGAGNAFC 
TGQDLKDASS SGNQIDLERT LRDEYTPMLE AIYTCPVPTI SAVNGPAAGA GANLALAADV
VIATESAYFL QAFAKIGLMP DAGGTWFMPR QMGLAKAMGA ALFADKITAR QASDWGMIWE
AVADDGFEAH WRARAAHLAS GPSKAFGAIK QALRQSTTNS LPDQLSLEAH LQGELGRSRD
FMEGVTAFVE KRKPDFEGR