| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1121 |
|---|
| Symbol | |
|---|
| ID | 4077242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 1206847 |
|---|
| End bp | 1207725 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638006425 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_613116 |
|---|
| Protein GI | 99080962 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3176] Putative hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.12997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGC GTCGCCATAT CGCGCGCGAT ATATCCTACT CCCACTCTGC CGAGACGCGG
CCGGGTCGGA TCATGATCCG TCTGATGGAA AACACCACCG GTCGGTTGCG GCTGATCAAA
CGGGCCAAGG GCTATGACAT GGAAGTCGCC TCCGGGCGTA GTTTCTGGGA TGTCATCGTC
GAACGCTATG GCCTCAGCCT CGATGTGGTG GGCGGCAGCC TCGACGCGAT CCCGCGCGAC
AAGCCGGTGA TCCTGATCGC CAACCATCCC TACGGCATCC TTGATGGGCT GATGATGGGG
CATATCCTGT CGCGCACGCG CTGCGATTTT CGCATGCTGG CGCATCAGGT GTTTCGCAAG
GCCGAGGATC TGAACAAGGT GATCCTGCCG ATTGATTTTG CCGAAACCAA AGAGGCAATG
AAGGTCAATC TGCAGACCCG CAAGGACGCG CTCGATTACT TGGGGCAGGG CGGCGCTATC
GGGATCTTTC CGGGCGGCAC GGTCTCCACG GCCTCCAAAC CCTTTGCACA TCCCATGGAT
CCGGGCTGGC GCGGCTTCAC CGCGCGGATG GTGGCCAAAT CGGATGCGGT GGTGGTGCCT
TTGTATTTCG ACGGCCATAC CTCGCGTCTG TTTCAGATCG CTTCGCACCT GCATTACACG
TTGCGCATGG GGCTCTTGAT TAAGGAGTTC AAAAAGCGCG TCGACACCCC CGTCAAGGTG
GTGATCGGTG AGCCCATCGG GCGCGATGTG CTTGACCCCT TGGCAAAGGA CTCCAAAGCA
ATGATGGATT TCCTGCGCAA AGCCACGTAT GAGCTGTCAC CAACACCGCT CAAATCCTAT
GACTACGGGT TCGAGTTCGA AGAAAAACAC CGGGCGTGA
|
|---|
| Protein sequence | MLERRHIARD ISYSHSAETR PGRIMIRLME NTTGRLRLIK RAKGYDMEVA SGRSFWDVIV
ERYGLSLDVV GGSLDAIPRD KPVILIANHP YGILDGLMMG HILSRTRCDF RMLAHQVFRK
AEDLNKVILP IDFAETKEAM KVNLQTRKDA LDYLGQGGAI GIFPGGTVST ASKPFAHPMD
PGWRGFTARM VAKSDAVVVP LYFDGHTSRL FQIASHLHYT LRMGLLIKEF KKRVDTPVKV
VIGEPIGRDV LDPLAKDSKA MMDFLRKATY ELSPTPLKSY DYGFEFEEKH RA
|
|---|
| |