Gene TM1040_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1116 
Symbol 
ID4077237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1198356 
End bp1198718 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID638006420 
Productglutaredoxin-like protein 
Protein accessionYP_613111 
Protein GI99080957 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CAAAGACCCG CATCGATGAA ACCGTCAAAG CCAACGATGT TGTGCTTTAC 
ATGAAAGGCA CCAAGGACAT GCCGCAGTGC GGGTTCTCCT CGCGCGTGGC CGGTGTGCTG
AACTACATCG GTGTCGACTA CACCGACGTG AACGTGCTTG CGGATGAGGA CATCCGCCAG
GGCATCAAGG ATTATTCCGA CTGGCCGACC ATCCCGCAGC TCTACATCAA GGGCGAATTC
GTGGGCGGTT GCGACATCAT CACCGAGATG ACGCTTTCGG GCGAACTCGA CGGAATGTTT
GAACAAAACG GCATCAGCTT CGACAAGGAT GCCGCCGACA AGATCCGCGA AGCCAACGCC
TGA
 
Protein sequence
MTDAKTRIDE TVKANDVVLY MKGTKDMPQC GFSSRVAGVL NYIGVDYTDV NVLADEDIRQ 
GIKDYSDWPT IPQLYIKGEF VGGCDIITEM TLSGELDGMF EQNGISFDKD AADKIREANA