| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1115 |
|---|
| Symbol | |
|---|
| ID | 4077236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 1197648 |
|---|
| End bp | 1198193 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638006419 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_613110 |
|---|
| Protein GI | 99080956 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3027] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAAG TGACCATTCA TATCGGGGGC CGCGATTTTG AGGTGTCCTG TCAGGAAGGC
GAAGAGAGCT TTCTGCATAT GGCGGCGGGG ATGCTCGACG ACGAGGCGCA GGTGCTGTCG
GATCAAATCG GGCGGATGCC CGAGGCGCGG ATGCTCTTGA TGGCGGGTTT GATGCTTGCG
GATAAGACCG CAGCCGTCGA GGACCGCATC AAGGAAGTCG AGGCCAAACT GGCCGAGAAA
GACGCGCTGC TCGAAGAGCG GGATGCAGAG CTCGAGGAGT TGCGCAACGC GCCACCACCG
CCTGCTGAAC AAATTGAGGT GCCCGTGGTG CCGCCGCAGG TCGCCGAGAC CCTCGCAGAG
CTTGCGGCAC GGGCCGAAGC GCTGGCGGGC GAGATCGAAG AAAAAGCCGC GCCAGATGAT
GACGAAGACG ACGATGAGGC TGCAACCACT CCCGCGGTGG ATCCGAGCGC CGACGCAATG
GCGGCAGAAG GCAATGCGGA TGAGGCCCGT GAAGAGACTC CTGACGACGT CAAGGAACAG
GTCTGA
|
|---|
| Protein sequence | MPEVTIHIGG RDFEVSCQEG EESFLHMAAG MLDDEAQVLS DQIGRMPEAR MLLMAGLMLA
DKTAAVEDRI KEVEAKLAEK DALLEERDAE LEELRNAPPP PAEQIEVPVV PPQVAETLAE
LAARAEALAG EIEEKAAPDD DEDDDEAATT PAVDPSADAM AAEGNADEAR EETPDDVKEQ
V
|
|---|
| |