Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1108 |
Symbol | |
ID | 4077815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1190660 |
End bp | 1191094 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638006412 |
Product | signal-transduction protein |
Protein accession | YP_613103 |
Protein GI | 99080949 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTTA AGTCGATCCT TAAGTCCAAA GATATCGCCG AAGTTGTCAC GATCACACCG GAGGCCACGA TTGAGGCGGC GGCGCAGCTC TTGTCCGAGC ATGGCATCGG GACAGTCGTT GTGTCGCCGG ATAAATCCAA ACCTGTTGGG ATACTCTCGG AGCGCGACAT CGTGCGCCAG CTCGCCAAGG TGGGGTCGGT TTGTCTCAAT CATAAGGTCG AGGACTACAT GACCCGCGAC GTGGTGACCT GCACCCAGGA CAGCGTTGCA GAGCAGGCGC TGAGCACGAT GACCGAAGGG CGATTCCGCC ATATGCCCGT TGTCGAAGAT GGCGCGCTGG TGGGGATCAT CTCGCTTGGA GATGTGGTCA AGGCGCAACT CAACGAGGTG GCGATGGAGA AAACCGCGCT TGAGGGCATG ATCATGGGAC ACTAG
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Protein sequence | MLVKSILKSK DIAEVVTITP EATIEAAAQL LSEHGIGTVV VSPDKSKPVG ILSERDIVRQ LAKVGSVCLN HKVEDYMTRD VVTCTQDSVA EQALSTMTEG RFRHMPVVED GALVGIISLG DVVKAQLNEV AMEKTALEGM IMGH
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