Gene TM1040_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1108 
Symbol 
ID4077815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1190660 
End bp1191094 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content58% 
IMG OID638006412 
Productsignal-transduction protein 
Protein accessionYP_613103 
Protein GI99080949 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTTA AGTCGATCCT TAAGTCCAAA GATATCGCCG AAGTTGTCAC GATCACACCG 
GAGGCCACGA TTGAGGCGGC GGCGCAGCTC TTGTCCGAGC ATGGCATCGG GACAGTCGTT
GTGTCGCCGG ATAAATCCAA ACCTGTTGGG ATACTCTCGG AGCGCGACAT CGTGCGCCAG
CTCGCCAAGG TGGGGTCGGT TTGTCTCAAT CATAAGGTCG AGGACTACAT GACCCGCGAC
GTGGTGACCT GCACCCAGGA CAGCGTTGCA GAGCAGGCGC TGAGCACGAT GACCGAAGGG
CGATTCCGCC ATATGCCCGT TGTCGAAGAT GGCGCGCTGG TGGGGATCAT CTCGCTTGGA
GATGTGGTCA AGGCGCAACT CAACGAGGTG GCGATGGAGA AAACCGCGCT TGAGGGCATG
ATCATGGGAC ACTAG
 
Protein sequence
MLVKSILKSK DIAEVVTITP EATIEAAAQL LSEHGIGTVV VSPDKSKPVG ILSERDIVRQ 
LAKVGSVCLN HKVEDYMTRD VVTCTQDSVA EQALSTMTEG RFRHMPVVED GALVGIISLG
DVVKAQLNEV AMEKTALEGM IMGH