| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1101 |
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| Symbol | |
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| ID | 4077808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1181900 |
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| End bp | 1182772 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006405 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_613096 |
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| Protein GI | 99080942 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCG GATTTATCGG ACTGGGCAAC ATGGGCGGCC CGATGGCGGC CAATCTCGCC
AAGGCAGGCC ATAGCGTTAC CGGCTTTGAC ATGGCGGATG TCTCGATCGA AGGCGTCTCC
CTCGCCAAGA GCGCGGCCGA GGCCGCAACG GGCGCGGATG TGGTGATCAC CATGCTGCCC
AATGGTGACA TCCTGCGCCA TGTCGCCTCC GAGATCATCC CCGCCATGAC CAATGGCGCG
GCTTTTGTGG ATTGCTCCAC CGTTGATGTG GACAGCGCCC GCGCGGTGGC GCAACAGGCG
GCAGAGGCCG GGCTTCTGGC CGTGGATGCG CCGGTCTCCG GTGGCATCGG TGGGGCTGCG
GGCGGCACGC TCACCTTTAT GGCGGGCGGA TCTGAGGAGG CCTTTGCCAA GGCCGCACCG
CTCTTTGATA TCATGGGCCA GAAGGCCGTG CATTGCGGCG ACTCCGGCGC CGGTCAGGCC
GCCAAGATCT GCAACAACAT GATCCTCGGC GTCACCATGA TCGCCACCTG CGAAGCCTTT
GCGCTGGCCG ACAAACTCGG CCTTGATCGC CAGAAGATGT TCGATGTGGT CTCGACCTCC
TCAGGCTACA GCTGGACCAT GAACGCCTAT TGCCCCGCAC CCGGCGTCGG CCCGCAGTCC
CCCGCCGACA ACGATTACCA GCCGGGCTTT GCCGCCGATT TGATGCTGAA GGACCTGCGC
CTGTCGCAGC AGGCCGCCGG CAGCGCCGAT GCCGACACCC CGATGGGCAA ACTGGCCGAA
GCGCTCTACA GCCAGTTCGT CGACAAAGAG GACGGCAAGG GCAAGGATTT CTCCGCCATG
TTGCCGCGCT TTGAAAAACG CGGCCGCAGC TAG
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| Protein sequence | MQIGFIGLGN MGGPMAANLA KAGHSVTGFD MADVSIEGVS LAKSAAEAAT GADVVITMLP
NGDILRHVAS EIIPAMTNGA AFVDCSTVDV DSARAVAQQA AEAGLLAVDA PVSGGIGGAA
GGTLTFMAGG SEEAFAKAAP LFDIMGQKAV HCGDSGAGQA AKICNNMILG VTMIATCEAF
ALADKLGLDR QKMFDVVSTS SGYSWTMNAY CPAPGVGPQS PADNDYQPGF AADLMLKDLR
LSQQAAGSAD ADTPMGKLAE ALYSQFVDKE DGKGKDFSAM LPRFEKRGRS
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