| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1094 |
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| Symbol | |
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| ID | 4076327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1172453 |
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| End bp | 1173727 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006398 |
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| Product | major facilitator transporter |
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| Protein accession | YP_613089 |
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| Protein GI | 99080935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAG TTCTGTCGAG CGCCTGGGCG CTTTTGCTGG GCATTGGCCT TTTGATGTTG
GGCAACGGCC TGCAAGGCAC GCTGCTGGGT GTGCGCGGTG GCATCGAGGG CTATTCCGCG
CTCACCATGT CGCTGGTGAT GTCCACCTAT TTTGTGGGCT TGCTCCTGGG GTCCTGGGTG
GCGCCGGGGA TGATCCGGCG TGTGGGCCAT GTGCGGGTCT TTGCGGCGCT GGCCTCGCTG
ATTTCGGCGG TGATGGTGAT CTATCCCGCG CTGCCCAACC CGATTGTCTG GATGCTGGGC
CGTCTGGTCG TGGGGTTCTG CTTTTCTGGC GTGTATGTCA CCGCCGAAAG CTGGCTCAAC
AATGCGGCTG ACAACCAGAA CCGAGGCAAG GCGCTCTCTC TCTATATGGT CGTGATGACA
CTGGGGCTGG TGGCCGCACA GGGTTTCATC CTGATCGGGG ACCCGGCGGG CTATCTGCCG
TTTGTGATCG CCTCCATCGC GGTTTCGATC TCCTTCGCCC CGATTTTGCT GTCGATTTCG
CCGACCCCCG CCTTTGATAC GGCCAAGCGG ATGACGCTTC GCGAATTGAT GCATGCCTCG
CCCCTTGGGT GTGTGGGGAT GTTCCTCATT GGCGGCGTGT TCTCGGCGCA GTTTGGTATG
TCTGCGGTCT ATGCCACCGA GGCTGGGATG GAGCTGCATC AGGTTTCGCT CTTTGCGGCG
AGCTTCTATG TCGGTGCGCT CTTTATGCAG TTCCCGCTGG GGCTGCTGTC CGACCGGATG
GATCGACGGG TGCTGATCAT GATCGTGGCA GGGGTCGCCG GGGTGACCTC GGTGCTGGCG
ATGCTGCTTG GGGGCACGTT CAGCCTGCTT CTGCTGGCCG CCTTTGTGAT CGGCGGGCTG
ATCAACCCGC TCTATTCCTT GCTCCTGGCC CACACCAATG ACTTTCTCGA TCACGACGAT
ATGGCCTCTG CCTCGGGCGG GCTGATCTTT ATCAACGGGC TTGGCGCCTG TAGCGGGCCG
GTCATCATCG GCTGGCTGAT GTCGGACGCG ATGTTCGGAC CCAACGGGTT CTTCCTCTTC
ATGGCGATAT TGCTGGGCGT GTTGGTTCTT TATGCCGGGT ATCGCGCAAC GCAGCGTGCG
ACCATTCCAG TCGAAGAGAC CGGTGTCATG CCCGCCATGA GCCCGACCGC GACCTCGGTC
GCGGTAGAGG TGGCGCAGGA ATACGCCATC GAAACCGAGC TCGAAGAGCA AGACAGCGCC
ACAACCACGG GCTGA
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| Protein sequence | MLQVLSSAWA LLLGIGLLML GNGLQGTLLG VRGGIEGYSA LTMSLVMSTY FVGLLLGSWV
APGMIRRVGH VRVFAALASL ISAVMVIYPA LPNPIVWMLG RLVVGFCFSG VYVTAESWLN
NAADNQNRGK ALSLYMVVMT LGLVAAQGFI LIGDPAGYLP FVIASIAVSI SFAPILLSIS
PTPAFDTAKR MTLRELMHAS PLGCVGMFLI GGVFSAQFGM SAVYATEAGM ELHQVSLFAA
SFYVGALFMQ FPLGLLSDRM DRRVLIMIVA GVAGVTSVLA MLLGGTFSLL LLAAFVIGGL
INPLYSLLLA HTNDFLDHDD MASASGGLIF INGLGACSGP VIIGWLMSDA MFGPNGFFLF
MAILLGVLVL YAGYRATQRA TIPVEETGVM PAMSPTATSV AVEVAQEYAI ETELEEQDSA
TTTG
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