| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1089 |
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| Symbol | |
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| ID | 4076322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1163991 |
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| End bp | 1165322 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006393 |
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| Product | peptidase M23B |
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| Protein accession | YP_613084 |
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| Protein GI | 99080930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.156803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGGCA GACTTTTCTT ACGGTTTCAT GCGTTCCTTG AGCGTCGGTT CCCCGAGCGG
CGGGTCTTTC TCAAATCCGA CAGCGACACC CGTTTCATAC GCCTGAGCTC CGAGACCCAG
ATCGTCGCGG TCGCAGGGCT GACGCTGTTT GTGTCTTGGT CGATCGTCGC CACCGCCATC
GTTCTGATGG ACAGCATCGG CTCTGGCAAT TTCCGCGATC AGGCGCGGCG CGACCAGCAG
GTCTATCAGG AACGCCTGAA TGCGCTCTCG TCGGAACGCG ACCGCCGCGC CGAAGAGGCG
CTGGCCGCAC AGGATCGCTT TAATGCGGCG CTTGAGCAGA TCTCCACCAT GCAGTCCGAG
CTTCTGGCCT CAGAGACCCG CCGCCGCGAG CTTGAGACCG GGATCGACGT GATCCAGTCG
AACCTGCGCA AGGCCATCAG CGAGCGGGAA CTTTTGAAAC GCACCGTGCT GGAACTGCGC
GAGAAAACCG CGCCCGACAG CCCCGAGCAG GTGCTCGCGG CAACCGCGCC AGAGCAGCTC
GAATTCCTGA CCACGGCGCT GGCGGAAACC GCTGCCGAGC GCGACAAGAT CGAATCCAAT
GCCCAATCCG CCCTTGCACA GCGTGATGAT CTGGAGCTGG AACTGCGCCT CAGCGCACAG
CGCAACGATC AGATCTTCCG CCAGCTCGAA GAGGCGATGG CGATTTCCGT GGAGCCTCTG
AACAAGATGT TCTCCTCTGC GGGCCTGCCG CCCGATCGTA TTCTGGAGCA GGTGCGCCGC
GGCTATAATG GCGAAGGCGG CCCGCTGGAG CCCTTGTCGC TCTCGACCCG TGGCGAAGAG
CCAAGCCCCG ATGAAATCCG CGCCAATGCG CTTCTTAATC AGATGAGCCA GCTCAACCTC
TACCGGATAG CGGCCGCTCA GGCCCCCTTC TCGGTCCCCG TGAACCTCGG CCAGGTGCGC
CAGACCTCTG GCTTTGGCTA TCGCCGCGAC CCCAAGACGG GTGGTCGCAG GCTCCATAAA
GGATCGGATT TTGCGGGCAG CACCGGCACC GACATCTTTG CCACCGCCGA CGGTGTTGTC
ACCCATGCGG GCTGGCAGTC GGGCTATGGC AGGCTCGTCA AGATCCAACA TGCCTTTGGC
ATCGAAACCA GATATGCCCA TAATTCCAAC CTGCGCGTCA AAGTCGGCCA AAGGGTCTCG
CGCGGGGATC ACATTGCTGA TATGGGTAAC ACCGGACGGT CCACCGGGAC CCACCTCCAT
TACGAGGTCA GGGTCAATGG TAAACCCGTA AACCCCATGA TCTACATCAA GGCTGCGAGA
AATGTTTTCT AA
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| Protein sequence | MRGRLFLRFH AFLERRFPER RVFLKSDSDT RFIRLSSETQ IVAVAGLTLF VSWSIVATAI
VLMDSIGSGN FRDQARRDQQ VYQERLNALS SERDRRAEEA LAAQDRFNAA LEQISTMQSE
LLASETRRRE LETGIDVIQS NLRKAISERE LLKRTVLELR EKTAPDSPEQ VLAATAPEQL
EFLTTALAET AAERDKIESN AQSALAQRDD LELELRLSAQ RNDQIFRQLE EAMAISVEPL
NKMFSSAGLP PDRILEQVRR GYNGEGGPLE PLSLSTRGEE PSPDEIRANA LLNQMSQLNL
YRIAAAQAPF SVPVNLGQVR QTSGFGYRRD PKTGGRRLHK GSDFAGSTGT DIFATADGVV
THAGWQSGYG RLVKIQHAFG IETRYAHNSN LRVKVGQRVS RGDHIADMGN TGRSTGTHLH
YEVRVNGKPV NPMIYIKAAR NVF
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