| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1086 |
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| Symbol | |
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| ID | 4076319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1161820 |
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| End bp | 1162368 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006390 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_613081 |
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| Protein GI | 99080927 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTAAGC GTCTGAGCGC ACTGGCCCTT TTGGCGGCGT CGCCCGCTTT TGCCACCGGT
CTGGAGATCC AGGTCGAGGG CGAGGCCAAT GGCACCATCG TGATCGATCT CTTGGAAGAC
GTGGCGCCGA ACCACGTCGA ACAGATCGCT GCACTGGCCG CTGAGGGCCA GTATGATGGC
GTGGTATTTC ACCGCGTGAT CCAGGGCTTT ATGGCGCAGA CCGGTGATGT GCAGAACGGT
CGTCTCGGGT CCGACATGCG CTATGCTGGC ACCGGCGGCT CGGACCGCCC GGATCTGGCC
GCCGAGTTCT CTGACGTGCC GTTCGATCGC GGCGTCGTTG GCATGGCGCG CTCGCAGGAT
CCCGACAGCG CCAACTCGCA GTTCTTTATC ATGTTTGATG AGGGCCACTT CCTGAACGGT
CAATACACCG TTGTGGGCCG TGTCACCGAA GGCATGGAGA TCGTCGATCA GATCAAACGC
GGCCACCCGC GGTCTGGTGC AATCACCGGC AGGCCGGATG TGATGAGCAA GGTCACCGTC
ACCGAGTAA
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| Protein sequence | MLKRLSALAL LAASPAFATG LEIQVEGEAN GTIVIDLLED VAPNHVEQIA ALAAEGQYDG
VVFHRVIQGF MAQTGDVQNG RLGSDMRYAG TGGSDRPDLA AEFSDVPFDR GVVGMARSQD
PDSANSQFFI MFDEGHFLNG QYTVVGRVTE GMEIVDQIKR GHPRSGAITG RPDVMSKVTV
TE
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