| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1079 |
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| Symbol | |
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| ID | 4076312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1155145 |
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| End bp | 1156158 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006383 |
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| Product | pyruvate dehydrogenase (lipoamide) |
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| Protein accession | YP_613074 |
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| Protein GI | 99080920 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.846482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA GAAAAAGCGC TCAGAAATCA AATGTTTCCG CCGAAGAACT GACCAAGTAC
TACCGCGAAA TGCTGTTGAT CCGGCGATTC GAGGAAAAGG CGGGTCAGCT CTACGGCATG
GGGTTGATTG GCGGTTTCTG CCACCTCTAC ATCGGTCAGG AAGCCGTTGT GGTCGGCCTT
GAGGCCGCCG CAGAAGAAGG CGACAAACGC GTCACCTCAT ATCGCGACCA CGGGCACATG
CTCGCCTGCG GCATGGATGC CGGCGGCGTG ATGGCCGAAC TCACCGGTCG CGAGGGCGGC
TACTCCAAGG GCAAGGGCGG CTCCATGCAC ATGTTCTCCA AGGAGAAGCA TTTCTATGGT
GGCCACGGCA TCGTCGGCGC GCAGGTGCCG CTCGGCGCAG GCCTTGCCTT TTCCGACAAA
TACAAGGGCA ACGACCGCGT GACCTTCACC TATTTTGGCG ATGGCGCGGC GAACCAGGGC
CAGGTCTACG AGACCTACAA CATGGCGCAG CTCTGGGATC TGCCGGTGAT TTTTGTCATT
GAAAATAACC AATACGCCAT GGGCACGAGC GTCCAGCGCT CCACCAAGTC GCCCGCGCTC
TGGAAGCGCG GCGAGGCCTA CGGCATCAAG GGCGAAGAAG TGGACGGCAT GAACGTTCTG
GCCGTGAAAG AGGCCGGCGA GCGCGCCGTG GCCCACTGCC GCGCGGGCAA GGGTCCCTAT
ATCCTCGAGG TCAAAACCTA CCGCTATCGC GGCCACTCCA TGTCGGACCC GGCGAAATAC
CGGACCCGCG AGGAAGTGCA GAAAATGCGC GAGGAACGCG ATCCGATCGA ACAGGTCCGC
GAGATGCTGC TCACCGGCAA GCACGCCTCC GAGGAAGACC TCAAAGCCAT CGACAAAGAG
ATCAAGGATA TCGTCAACAA GTCCGCTGAT TTCGCCAAAG AGAGCCCCGA GCCCGCGCTC
GAGGAGCTTT GGACCGATAT TTACGCCGAC GATATTCCGC AAAAGAGCGC CTGA
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| Protein sequence | MAARKSAQKS NVSAEELTKY YREMLLIRRF EEKAGQLYGM GLIGGFCHLY IGQEAVVVGL
EAAAEEGDKR VTSYRDHGHM LACGMDAGGV MAELTGREGG YSKGKGGSMH MFSKEKHFYG
GHGIVGAQVP LGAGLAFSDK YKGNDRVTFT YFGDGAANQG QVYETYNMAQ LWDLPVIFVI
ENNQYAMGTS VQRSTKSPAL WKRGEAYGIK GEEVDGMNVL AVKEAGERAV AHCRAGKGPY
ILEVKTYRYR GHSMSDPAKY RTREEVQKMR EERDPIEQVR EMLLTGKHAS EEDLKAIDKE
IKDIVNKSAD FAKESPEPAL EELWTDIYAD DIPQKSA
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