Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1077 |
Symbol | |
ID | 4076310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1152399 |
End bp | 1153739 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638006381 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_613072 |
Protein GI | 99080918 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.144082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.644909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTG AAATTCTCAT GCCCGCCCTC TCTCCCACCA TGGAGGAAGG CACGCTGGCG AAATGGCTCG TCAAAGAAGG CGACACCGTC TCCTCTGGCG ATCTGATTGC CGAAATCGAA ACCGACAAGG CCACGATGGA ATTCGAGGCC GTGGACGAAG GTGTCGTTGG CAAGATCCTG ATCGCCGAAG GCTCCGAGGG TGTGAAGGTC AACACCCCCA TCGCGGTGCT GCTGGAAGAC GGCGAAAGCG CCGATGATAT CGACACATCG GCGGCAACAC CGGAAGCGGC CCCCGCCGCT GACGCGGCTG CCGAGGAGGC GCCTGCCGCC GCCGAGAAAG CCGCCGCCCC GGCTGCGGCA ACCCCTGCCC CGGCAGCGCC CGCTGCGGCA GATGGCTCGC GCATCTTTGC CTCGCCACTG GCGCGTCGCA TCGCTGCCGA CAAGGGACTC GACCTGAGCG CCATCAAAGG CTCCGGCCCC CGTGGTCGCA TCATCAAGGT GGACGTGGAA AACGCCACCG CCGCGCCCAA GGCCGACGCA CAGACCGACG CGCAGGCTGC CGCCGCCCCT GCGGCAAGTG CCTCCCCCGC GCCAGTCGCA GCCCCCGCCG GCCCCTCCGC CGATCAGGTG GCCAAGATGT ACGAGGGCCG CAGCTTCGAG GAAGTCAAAC TCGACGGGAT GCGCAAGACC ATTGCCGCGC GTCTCACCGA AGCCAAGCAG ACCATCCCGC ATTTCTACCT GCGCCGCGAC ATCCAGCTCG ACGCGCTGTT GAAATTCCGC GCGCAGCTCA ACAAGCAGCT TGAAGGCCGC GGTGTGAAGC TCTCGGTCAA CGACTTCATC ATCAAGGCCG TGGCGCTGGC GCTGCAATCG GTGCCGGACG CCAACGCCGT GTGGGCCGGG GATCGTGTGC TCAAGATGAA AGCCTCCGAT GTGGCCGTTG CGGTCGCCAT CGACGGCGGT CTCTTCACGC CGGTCCTGCA AGACGCCGAC ATGAAGTCGC TGTCGGCCCT GTCGAGCGAA ATGAAAGACC TCGCCACCCG TGCGCGCGAC CGCAAGCTTG CGCCGCATGA ATACCAGGGC GGCTCCTTCG CGATCTCCAA CCTCGGCATG TTCGGCATCG ACAATTTCGA CGCCATCGTG AACCCGCCGC ATGCGGGTAT TCTGGCCGTC GGCTCCGGCG TCAAGAAACC CGTGGTGGGC GCCGATGGCG AGCTGACCGT TGCCACCGTC ATGAGCGTCA CCATGTCCGT GGATCACCGC GTGATCGACG GCGCATTGGG CGCGGACCTC TTGAAGGCCA TCGTCGACAA TCTGGAAAAC CCGATGGTGA TGCTGGCCTG A
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Protein sequence | MPTEILMPAL SPTMEEGTLA KWLVKEGDTV SSGDLIAEIE TDKATMEFEA VDEGVVGKIL IAEGSEGVKV NTPIAVLLED GESADDIDTS AATPEAAPAA DAAAEEAPAA AEKAAAPAAA TPAPAAPAAA DGSRIFASPL ARRIAADKGL DLSAIKGSGP RGRIIKVDVE NATAAPKADA QTDAQAAAAP AASASPAPVA APAGPSADQV AKMYEGRSFE EVKLDGMRKT IAARLTEAKQ TIPHFYLRRD IQLDALLKFR AQLNKQLEGR GVKLSVNDFI IKAVALALQS VPDANAVWAG DRVLKMKASD VAVAVAIDGG LFTPVLQDAD MKSLSALSSE MKDLATRARD RKLAPHEYQG GSFAISNLGM FGIDNFDAIV NPPHAGILAV GSGVKKPVVG ADGELTVATV MSVTMSVDHR VIDGALGADL LKAIVDNLEN PMVMLA
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